RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CALCRP30988 508 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CHRNA4P43681 627 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 STARP49675 285 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CRISP3P54108 245 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 WNT3AP56704 352 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SNRPGP62308 76 aaKnown RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ACVR1Q04771 509 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 MXD1Q05195 221 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ADIGQ0VDE8 80 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 MAP4K2Q12851 820 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SP140Q13342 867 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PPIGQ13427 754 aaKnown RBP eCLIP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CAMK2DQ13557 499 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM201Q5SNT2 666 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 WASH2PQ6VEQ5 465 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ARMCX2Q7L311 632 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM17Q86X19 198 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 STX12Q86Y82 276 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CRYBG2Q8N1P7 616 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 NANOGP1Q8N7R0 232 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 OR6C4Q8NGE1 309 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 OR6B3Q8NGW1 331 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ADAMTS14Q8WXS8 1223 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 RFT1Q96AA3 541 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FUBP1Q96AE4 644 aaKnown RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CHFRQ96EP1 664 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FCRL1Q96LA6 429 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 TBATAQ96M53 351 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FEVQ99581 238 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 NLNQ9BYT8 704 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 DNTTIP1Q9H147 329 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SLC25A51Q9H1U9 297 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ATP13A1Q9HD20 1204 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 RNF146Q9NTX7 359 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 IMP3Q9NV31 184 aaKnown RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 GPRC5BQ9NZH0 403 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CTSFQ9UBX1 484 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 EDARQ9UNE0 448 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 MGAMO43451 1857 aa7.77□□□□□ -1.16
ATG4A-201ENST00000343524 BDP1A6H8Y1 2624 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 A0A0G2JPF8 293 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 A0A1B0GTL3 188 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 TMEM82A0PJX8 343 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 C2orf81A6NN90 581 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 HNRNPCL3B7ZW38 293 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 FAM72CH0Y354 149 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SELENOFO60613 162 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 RP2O75695 350 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PLATP00750 562 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 HNRNPCL4P0DMR1 293 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 COL11A1P12107 1806 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 HOXB9P17482 250 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 RBMS1P29558 406 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PRDX3P30048 256 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 FGF9P31371 208 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SSTR4P31391 388 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PIK3CGP48736 1102 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 ERVPABLB-1P60509 514 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 CACNB2Q08289 660 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 GPR176Q14439 515 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 GRM7Q14831 915 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PCBP2Q15366 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 TEAD4Q15561 434 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SWI5Q1ZZU3 235 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PLK5Q496M5 336 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 USP39Q53GS9 565 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PDSS1Q5T2R2 415 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 HES5Q5TA89 166 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 FAM72AQ5TYM5 149 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 EEF1DP3Q658K8 133 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 ELP2Q6IA86 826 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 FAM72DQ6L9T8 149 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 QSOX2Q6ZRP7 698 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 GLCCI1Q86VQ1 547 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 FAM72BQ86X60 149 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 GPSM1Q86YR5 675 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PDZD9Q8IXQ8 264 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 LGI4Q8N135 537 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 C7orf31Q8N865 590 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 OR11H4Q8NGC9 324 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SETD7Q8WTS6 366 aaKnown RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PIH1D2Q8WWB5 315 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 PRMT6Q96LA8 375 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 DEFB118Q96PH6 123 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 UBL7Q96S82 380 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 YIPF4Q9BSR8 244 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-201ENST00000343524 RNF32Q9H0A6 362 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 FZD3Q9NPG1 666 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 B3GAT2Q9NPZ5 323 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 DLL4Q9NR61 685 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 BABAM2Q9NXR7 383 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 KCTD5Q9NXV2 234 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SLCO1C1Q9NYB5 712 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms