RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SLC25A46Q96AG3 418 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 C12orf66Q96MD2 445 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 MS4A4EQ96PG1 132 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 NELL2Q99435 816 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 SUCNR1Q9BXA5 334 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 B3GNT5Q9BYG0 378 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 WDR11Q9BZH6 1224 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 SPRTNQ9H040 489 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 WNT5BQ9H1J7 359 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ABCG5Q9H222 651 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 PRDM12Q9H4Q4 367 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 PPP1R3EQ9H7J1 279 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ANKRA2Q9H9E1 313 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF226Q9NYT6 803 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 NYAP2Q9P242 653 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF624Q9P2J8 865 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 DNAJB11Q9UBS4 358 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 PCDHB7Q9Y5E2 793 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF670-ZNF695F2Z2N8 137 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ULK1O75385 1050 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 OR4F21O95013 312 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 HPXP02790 462 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 LTA4HP09960 611 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 NFYBP25208 207 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 EIF2S3P41091 472 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 MAGEA2P43356 314 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 PPT1P50897 306 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 RABGGTBP53611 331 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 HABP2Q14520 560 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 NR6A1Q15406 480 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 SF3A2Q15428 464 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 AVPI1Q5T686 147 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 OR4F3Q6IEY1 312 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 OR2T5Q6IEZ7 315 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 CMIPQ8IY22 773 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ARRDC1Q8N5I2 433 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 OR4F6Q8NGB9 312 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 OR2T29Q8NH02 315 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 OR52J3Q8NH60 311 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 CDK15Q96Q40 435 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 ATXN3LQ9H3M9 355 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 TMEM184CQ9NVA4 438 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 RLIMQ9NVW2 624 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 HCN2Q9UL51 889 aa9.24□□□□□ -0.93
PTCHD4-201ENST00000339488 MIA3Q5JRA6 1907 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TMEM82A0PJX8 343 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 MEX3AA1L020 520 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 OR6C74A6NCV1 312 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 WASH3PC4AMC7 463 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 RFXAPO00287 272 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TCAPO15273 167 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 OIP5O43482 229 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 RAD1O60671 282 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 MBTD1Q05BQ5 628 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 PLA2G7Q13093 441 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 SMCO1Q147U7 214 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ERFEQ4G0M1 354 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TMEM207Q6UWW9 146 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 BCDIN3DQ7Z5W3 292 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 KLBQ86Z14 1044 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF614Q8N883 585 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 MARS2Q96GW9 593 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 RIT2Q99578 217 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TAPBPLQ9BX59 468 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ABCG8Q9H221 673 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 DCAF13Q9NV06 445 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 DUSP12Q9UNI6 340 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 A0A0A6YYC8 382 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 GSAPA4D1B5 854 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 NEDD8-MDP1E9PL57 170 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 I3L1I5 382 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ARPC5O15511 151 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 NIPSNAP2O75323 286 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 EDN1P05305 212 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 G6PDP11413 515 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 MST1P26927 711 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 NOVP48745 357 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TAS2R60P59551 318 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 EIF4HQ15056 248 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 EIF2S3LQ2VIR3 472 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 NOMO2Q5JPE7 1267 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 MFSD14BQ5SR56 506 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 MANEAQ5SRI9 462 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 KIAA0319Q5VV43 1072 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 GPR65Q8IYL9 337 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 CARFQ8N187 725 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ZFP41Q8N8Y5 198 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ELP5Q8TE02 316 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 CLEC4CQ8WTT0 213 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 SCMH1Q96GD3 660 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 DDX31Q9H8H2 851 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 PDGFCQ9NRA1 345 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TAS2R3Q9NYW6 316 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 RCOR3Q9P2K3 495 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 ING1Q9UK53 422 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms