RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CD163Q86VB7 1156 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 SLC22A16Q86VW1 577 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 ACOT4Q8N9L9 421 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 OR52N2Q8NGI0 321 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 PTPMT1Q8WUK0 201 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-202ENST00000337571 ASB5Q8WWX0 329 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 SREK1Q8WXA9 508 aaKnown RBP9.9□□□□□ -0.82
CAPN3-202ENST00000337571 RND1Q92730 232 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 RGMAQ96B86 450 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 DGAT2Q96PD7 388 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 RASL10BQ96S79 203 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 DMRTA2Q96SC8 542 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 CSF3RQ99062 836 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 SPOCK3Q9BQ16 436 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 ALG9Q9H6U8 611 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 MS4A12Q9NXJ0 267 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 NUDT4Q9NZJ9 180 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 ZNF223Q9UK11 482 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-202ENST00000337571 ACOT9Q9Y305 439 aa9.9□□□□□ -0.82
CAPN3-202ENST00000337571 NCOA6Q14686 2063 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-202ENST00000337571 PDZD2O15018 2839 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 OTOGQ6ZRI0 2925 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SYCE1LA8MT33 242 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 TGFBR3LH3BV60 316 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 C19orf84I3L1E1 186 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 K7EPI3 171 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SAP18O00422 153 aaKnown RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 RAD51CO43502 376 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 PRKNO60260 465 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SH3BGRLO75368 114 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 OR6B1O95007 311 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 WISP3O95389 354 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 TBX6O95947 436 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 P04436 131 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 LTA4HP09960 611 aaKnown RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 CAPN3P20807 821 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 HIST1H1TP22492 207 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 CHRNB4P30926 498 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 CASQ1P31415 396 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SOX3P41225 446 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SSR2P43308 183 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 MAGEA4P43358 317 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 KIR3DL1P43629 444 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 RAP1GDS1P52306 607 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 RNF4P78317 190 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 PHEXP78562 749 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 DDX39BQ13838 428 aaKnown RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ZKSCAN8Q15776 578 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF750Q32MQ0 723 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 KBTBD12Q3ZCT8 623 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 OR4C11Q6IEV9 310 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ADNP2Q6IQ32 1131 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 MEX3BQ6ZN04 569 aaKnown RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 FAM47EQ6ZV65 393 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 NCCRP1Q6ZVX7 275 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ACAD11Q709F0 780 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 FGD2Q7Z6J4 655 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ISCA2Q86U28 154 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 MYLK4Q86YV6 388 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 CHERPQ8IWX8 916 aaKnown RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 OR2M7Q8NG81 312 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 OR7G3Q8NG95 312 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 OR8K3Q8NH51 312 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SLC2A12Q8TD20 617 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF473Q8WTR7 871 aaKnown RBP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SGCZQ96LD1 299 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 MAPKAP1Q9BPZ7 522 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 FAM173AQ9BQD7 235 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 MS4A8Q9BY19 250 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 TRIM8Q9BZR9 551 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 LDAHQ9H6V9 325 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 KCNJ16Q9NPI9 418 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SACM1LQ9NTJ5 587 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.89□□□□□ -0.83
CAPN3-202ENST00000337571 ITGB1BP2Q9UKP3 347 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 CLDN16Q9Y5I7 305 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 FBN2P35556 2912 aa9.89□□□□□ -0.83
CAPN3-202ENST00000337571 TMEM200CA6NKL6 621 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 FAM166BA8MTA8 275 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 FOXO6A8MYZ6 492 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 NPIPA2E9PIF3 369 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 NPIPA3F8WFD2 350 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 UBXN8O00124 270 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 RTCAO00442 366 aaKnown RBP9.88□□□□□ -0.83
CAPN3-202ENST00000337571 ADAM10O14672 748 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 FANCGO15287 622 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PRAMEF4O60810 478 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 KERAO60938 352 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 SLC35E2BP0CK96 405 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 CD22P20273 847 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PTX3P26022 381 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-202ENST00000337571 HK2P52789 917 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 GPX6P59796 221 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 ID2Q02363 134 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 C2orf54Q08AI8 447 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PMPCAQ10713 525 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 NAB1Q13506 487 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 SLC10A1Q14973 349 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms