RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SLC15A3Q8IY34 581 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 OR5T2Q8NGG2 359 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 SULT4A1Q9BR01 284 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 ZFP57Q9NU63 452 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 SYNGR4O95473 234 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 CFL1P23528 166 aaKnown RBP12.6□□□□□ -0.39
HLCS-201ENST00000336648 NUDT6P53370 316 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 MS4A13Q5J8X5 152 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 ZNF529Q6P280 563 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 NLGN2Q8NFZ4 835 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 OR2T33Q8NG76 320 aa12.6□□□□□ -0.39
HLCS-201ENST00000336648 SLIT2O94813 1529 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 HTRA2O43464 458 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 CLDN7O95471 211 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 GDI1P31150 447 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 GPX6P59796 221 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 ARL6IP1Q15041 203 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 CHRFAM7AQ494W8 412 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 PPP2R2DQ66LE6 453 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 HACD2Q6Y1H2 254 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 BMFQ96LC9 184 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 MAGIXQ9H6Y5 334 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 DNAJB6O75190 326 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 BCAS1O75363 584 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 HAPLN1P10915 354 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 FRKP42685 505 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 CLRN1P58418 232 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 GABARAPL2P60520 117 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 GDF6Q6KF10 455 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 BORAQ6PGQ7 559 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 HMGB4Q8WW32 186 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 KLK6Q92876 244 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 TCRBV7S3A2A0A539 114 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 A8MUA0 341 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 EIF1AYO14602 144 aaKnown RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 GRID2O43424 1007 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 RFPL1O75677 317 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 ZNF182P17025 639 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 EIF1AXP47813 144 aaKnown RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 SUOXP51687 545 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 PCLAFQ15004 111 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 TCEANCQ8N8B7 351 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 NPY6RQ99463 290 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 A8MVJ9 347 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 BLOC1S5-TXNDC5H3BN57 136 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 TSPAN15O95858 294 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 GNRHRP30968 328 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 DUSP3P51452 185 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 MEP1AQ16819 746 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 UNC5DQ6UXZ4 953 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 MAELQ96JY0 434 aaKnown RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 PIP5K1AQ99755 562 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 SYT4Q9H2B2 425 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 ZNF334Q9HCZ1 680 aaPredicted RBP12.59□□□□□ -0.39
HLCS-201ENST00000336648 SIRPGQ9P1W8 387 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 DLGAP4Q9Y2H0 992 aa12.59□□□□□ -0.39
HLCS-201ENST00000336648 RNF13O43567 381 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.39
HLCS-201ENST00000336648 GTF2F2P13984 249 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 PRKACBP22694 351 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 FXYD6P3P58550 94 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 GINS1Q14691 196 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 CARM1Q86X55 608 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 ZNF675Q8TD23 568 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 DOHHQ9BU89 302 aa12.58□□□□□ -0.39
HLCS-201ENST00000336648 FAM221BA6H8Z2 402 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 J3KR12 359 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 OR2B3O76000 313 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 ZNF35P13682 527 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 FGL2Q14314 439 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 PIGGQ5H8A4 983 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.58□□□□□ -0.4
HLCS-201ENST00000336648 THAP4Q8WY91 577 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 RANBP9Q96S59 729 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 TIGARQ9NQ88 270 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 RNF11Q9Y3C5 154 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 DNMT3AQ9Y6K1 912 aaPredicted RBP12.58□□□□□ -0.4
HLCS-201ENST00000336648 UNC119BA6NIH7 251 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 VILLO15195 856 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 RASAL1O95294 804 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 SFTPBP07988 381 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 HTR2BP41595 481 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 GK3PQ14409 553 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 COQ5Q5HYK3 327 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 ZFAND4Q86XD8 727 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 OR56A3Q8NH54 315 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 BCL7BQ9BQE9 202 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 APBB3O95704 486 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms