RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GLYR1Q49A26 553 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TMIGD1Q6UXZ0 262 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 MACC1Q6ZN28 852 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 NXPE1Q8N323 547 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 Q8N402 240 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TCEANCQ8N8B7 351 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CREB3L4Q8TEY5 395 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 AUTS2Q8WXX7 1259 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 MED8Q96G25 268 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 WDFY2Q96P53 400 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 MIXL1Q9H2W2 232 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 NDRG2Q9UN36 371 aaKnown RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 A0A1B0GVM2 712 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TRBC2A0A5B9 178 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 HYKKA2RU49 373 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 H3BNC9 293 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 GAPDHSO14556 408 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SCAMP2O15127 329 aaKnown RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 KPNA5O15131 536 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 OR10H3O60404 316 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 APOL3O95236 402 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 GJB5O95377 273 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PRKAR1AP10644 381 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 ICAM2P13598 275 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 ALAS2P22557 587 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 MAPK12P53778 367 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PHC2Q8IXK0 858 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TCTE3Q8IZS6 198 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SLC35A5Q9BS91 424 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TMEM245Q9H330 911 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TXNL4BQ9NX01 149 aaKnown RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 NINQ8N4C6 2090 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 PRAMEF33A0A0G2JMD5 474 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ZAR1LA6NP61 321 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 SH3BP5O60239 455 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 PRAMEF10O60809 474 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 FKTNO75072 461 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 HBQ1P09105 142 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 GSTM1P09488 218 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 TNNI3P19429 210 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 GSTM5P46439 218 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 SLC9A3P48764 834 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 CDK6Q00534 326 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 IL18Q14116 193 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 GNA13Q14344 377 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF57Q68EA5 555 aaPredicted RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 L3MBTL4Q8NA19 623 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 NELL2Q99435 816 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 SPATA9Q9BWV2 254 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF282Q9UDV7 671 aaPredicted RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 PRAMEF25A6NGN4 478 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 PSIP1O75475 530 aaKnown RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 IFNA14P01570 189 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 IFNW1P05000 195 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 JUPP14923 745 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 HLA-DMAP28067 261 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 NSG1P42857 185 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 BCL2L1Q07817 233 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 CRTC2Q53ET0 693 aaPredicted RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 TYW3Q6IPR3 259 aaKnown RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ABI3BPQ7Z7G0 1075 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 KCTD7Q96MP8 289 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ZSCAN5AQ9BUG6 496 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 TSSK6Q9BXA6 273 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 TVP23BQ9NYZ1 205 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 YARS2Q9Y2Z4 477 aaKnown RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 RPL36Q9Y3U8 105 aaKnown RBP13.11□□□□□ -0.31
SYNE3-201ENST00000334258 PCDHB7Q9Y5E2 793 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
SYNE3-201ENST00000334258 ADAM12O43184 909 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 C6orf47O95873 294 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 HNF1BP35680 557 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SPAM1P38567 509 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 B2MP61769 119 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 MAB21L1Q13394 359 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 IRF5Q13568 498 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 NCF4Q15080 339 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 UAP1L1Q3KQV9 507 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ESCO2Q56NI9 601 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 CPA6Q8N4T0 437 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
SYNE3-201ENST00000334258 NIPAL2Q9H841 368 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SGK2Q9HBY8 427 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms