RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SNX7Q9UNH6 387 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 FADS2P1A8MWK0 482 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 H0YAE9 185 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 ACOX3O15254 700 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 ERAL1O75616 437 aaKnown RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PSKH1P11801 424 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF26P17031 533 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 AGXTP21549 392 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CENPAP49450 140 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 DPTQ07507 201 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 NDUFA9Q16795 377 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CDC73Q6P1J9 531 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 BLOC1S3Q6QNY0 202 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 LRRC70Q7Z2Q7 622 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 MINDY2Q8NBR6 621 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 GLB1L3Q8NCI6 653 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 OR52B6Q8NGF0 335 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 KAT2AQ92830 837 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 TMCO6Q96DC7 493 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 C3orf30Q96M34 536 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 ITPAQ9BY32 194 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 FAM118AQ9NWS6 357 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 ING4Q9UNL4 249 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 RNF6Q9Y252 685 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PDCD11Q14690 1871 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 OR6C74A6NCV1 312 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ADAMDEC1O15204 470 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 CD97P48960 835 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 PNLIPRP1P54315 467 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 CCINQ13939 588 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ERICH5Q6P6B1 374 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ENPP6Q6UWR7 440 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 UNC5DQ6UXZ4 953 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 TECPR1Q7Z6L1 1165 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 C10orf53Q8N6V4 93 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 RHEBL1Q8TAI7 183 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 XAGE5Q8WWM1 108 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 NEK6Q9HC98 313 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ENGP17813 658 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 DRD3P35462 400 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 HK3P52790 923 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 CCBE1Q6UXH8 406 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF517Q6ZMY9 492 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ISCA2Q86U28 154 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 AMIGO1Q86WK6 493 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF761Q86XN6 746 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 CEP76Q8TAP6 659 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 FAIM2Q9BWQ8 316 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 FGF22Q9HCT0 170 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 OAS3Q9Y6K5 1087 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 TMEM202A6NGA9 273 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 LOC730098B7Z3J9 87 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 MITFO75030 526 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ERN1O75460 977 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 DNAJA1P31689 397 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 IGFALSP35858 605 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 STX4Q12846 297 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 BORAQ6PGQ7 559 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 SYVN1Q86TM6 617 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 DTWD2Q8NBA8 298 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 OR10G2Q8NGC3 310 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 C11orf24Q96F05 449 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 PYURFQ96I23 114 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 BARD1Q99728 777 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 FNDC11Q9BVV2 318 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 IL21RQ9HBE5 538 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 CFL2Q9Y281 166 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 CARD8Q9Y2G2 431 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 SLC1A7O00341 560 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 AQP9O43315 295 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 NR4A2P43354 598 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ANXA11P50995 505 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 TSTQ16762 297 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 LCN8Q6JVE9 175 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 DUS1LQ6P1R4 473 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 MBOAT1Q6ZNC8 495 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ANKRD13BQ86YJ7 626 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 KRTCAP2Q8N6L1 136 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 TMEM102Q8N9M5 508 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 OR5AR1Q8NGP9 310 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 TP53INP1Q96A56 240 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 FUBP1Q96AE4 644 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 TUBA1CQ9BQE3 449 aa11.28□□□□□ -0.6
HDAC6-201ENST00000334136 THUMPD1Q9NXG2 353 aaKnown RBP11.28□□□□□ -0.6
HDAC6-201ENST00000334136 KIR2DS5A0A0G2JLQ3 304 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 A0A0G2JNG1 304 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 A0A1B0GW55 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 C2orf74A8MZ97 194 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 KIR2DS3K7RE56 304 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 DUX4L2P0CJ85 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 DUX4L3P0CJ86 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 DUX4L4P0CJ87 422 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms