RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 FCHO2Q0JRZ9 810 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 TUBA3EQ6PEY2 450 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 NLRP8Q86W28 1048 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 TRAPPC5Q8IUR0 188 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 OTUB1Q96FW1 271 aaPredicted RBP11.74□□□□□ -0.53
VPS33B-201ENST00000333371 HHATLQ9HCP6 504 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 MUTYHQ9UIF7 546 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 UGT2A1Q9Y4X1 527 aa11.74□□□□□ -0.53
VPS33B-201ENST00000333371 PNMA8CA0A1B0GUJ8 204 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 H3BQ06 376 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CCRL2O00421 344 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PTTG1O95997 202 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 LINC00271P0C7V0 271 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ARAFP10398 606 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF30P17039 623 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PTPN2P17706 415 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 XPAP23025 273 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TNFSF8P32971 234 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ALDH9A1P49189 494 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 COPZ1P61923 177 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF33BQ06732 778 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 COL9A2Q14055 689 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CRB2Q5IJ48 1285 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 LY6G5CQ5SRR4 150 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TRIM40Q6P9F5 258 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 BRAT1Q6PJG6 821 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CEACAM20Q6UY09 585 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 NRARPQ7Z6K4 114 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CCDC190Q86UF4 302 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 MEX3DQ86XN8 651 aaKnown RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 OXR1Q8N573 874 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 IQCF1Q8N6M8 205 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 HORMAD2Q8N7B1 307 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 IL17RDQ8NFM7 739 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 VN1R2Q8NFZ6 395 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 GPR151Q8TDV0 419 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 UCN3Q969E3 161 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 FOPNLQ96NB1 174 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CTRCQ99895 268 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ZSCAN5AQ9BUG6 496 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 OR2AG1Q9H205 316 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TMEM38AQ9H6F2 299 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TDP1Q9NUW8 608 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PRKAG2Q9UGJ0 569 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TBC1D24Q9ULP9 559 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PCYT1BQ9Y5K3 369 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PEX16Q9Y5Y5 336 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 KIF26AQ9ULI4 1882 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 FGF19O95750 216 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 IFNW1P05000 195 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ELFN1P0C7U0 828 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 DSTNP60981 165 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TAP2Q03519 686 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PLAG1Q6DJT9 500 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF770Q6IQ21 691 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF367Q7RTV3 350 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TRMT11Q7Z4G4 463 aaKnown RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 VN1R5Q7Z5H4 357 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TECPR1Q7Z6L1 1165 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 SLC34A3Q8N130 599 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 MRPL43Q8N983 215 aaKnown RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 GPR32P1Q8NGA4 272 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CEP19Q96LK0 163 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TP63Q9H3D4 680 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 SNTG1Q9NSN8 517 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 KLK4Q9Y5K2 254 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ANKDD1BA6NHY2 528 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 H3BN98 237 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF197O14709 1029 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 DYRK3O43781 588 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CCNKO75909 580 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 APOL3O95236 402 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 RHOP08100 348 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 C1GALT1C1LP0DN25 315 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ITGA2P17301 1181 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 DDX6P26196 483 aaKnown RBP eCLIP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 PDE7AQ13946 482 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 EIF4HQ15056 248 aaKnown RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 RSBN1Q5VWQ0 802 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 LIPIQ6XZB0 460 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 DEF8Q6ZN54 512 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 GATAD2AQ86YP4 633 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 LAX1Q8IWV1 398 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 SLC38A5Q8WUX1 472 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 SLC6A18Q96N87 628 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CDCA4Q9BXL8 241 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 ASPNQ9BXN1 380 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 MIEF1Q9NQG6 463 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CLN6Q9NWW5 311 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 CXXC1Q9P0U4 656 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-201ENST00000333371 DYRK1BQ9Y463 629 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 WNT6Q9Y6F9 365 aa11.73□□□□□ -0.53
VPS33B-201ENST00000333371 TLR4O00206 839 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 B4GALT2O60909 372 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms