RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SOX3P41225 446 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 PIK3CGP48736 1102 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SH3BP2P78314 561 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 TAF1AQ15573 450 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 MICBQ29980 383 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 HECTD3Q5T447 861 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 KIAA0319Q5VV43 1072 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF57Q68EA5 555 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF367Q7RTV3 350 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CIR1Q86X95 450 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ADGRF3Q8IZF5 1079 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 AKR7LQ8NHP1 331 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ZDHHC1Q8WTX9 485 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SCRN2Q96FV2 425 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CRELD1Q96HD1 420 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 MCOLN1Q9GZU1 580 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CRISPLD1Q9H336 500 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 RAD18Q9NS91 495 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 EXO1Q9UQ84 846 aaKnown RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CBY1Q9Y3M2 126 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 MYLKQ15746 1914 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CCL15-CCL14A0A0B4J2E2 113 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 D6RAR5 112 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 AZIN1O14977 448 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ADAM12O43184 909 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 NBNO60934 754 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CDRT1O95170 752 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CRYBA1P05813 215 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ENGP17813 658 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 PAICSP22234 425 aaKnown RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 PSMD4P55036 377 aaKnown RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 TPI1P60174 286 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 BTG1P62324 171 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SF3A2Q15428 464 aaKnown RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 CCL15Q16663 113 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 PRAMEF13Q5VWM6 474 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 BICRALQ6AI39 1079 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 OR2T12Q8NG77 320 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 KIAA1143Q96AT1 154 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 RHOVQ96L33 236 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM43Q9BTV4 400 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ELAC1Q9H777 363 aaKnown RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 NME7Q9Y5B8 376 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SYNJ2BP-COX16A0A087WUM0 186 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 LOC105369274A0A096LPK9 316 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR2W5A6NFC9 320 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ANKDD1BA6NHY2 528 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 G3V3Q6 166 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 CA12O43570 354 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 DIRAS1O95057 198 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 HIST1H2AGP0C0S8 130 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 PRR35P0CG20 571 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 PRG2P13727 222 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 HIST1H2ADP20671 130 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 LAP3P28838 519 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 INPP1P49441 399 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 STX4Q12846 297 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 DDI2Q5TDH0 399 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 HIST2H2AA3Q6FI13 130 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ESRP1Q6NXG1 681 aaKnown RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 EFCAB12Q6NXP0 572 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 TAPT1Q6NXT6 567 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SERINC5Q86VE9 423 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR4N4Q8N0Y3 316 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 NPWQ8N729 165 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR10A6Q8NH74 314 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR1S1Q8NH92 325 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SHROOM3Q8TF72 1996 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 WNT8BQ93098 351 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 MSLNLQ96KJ4 702 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 HIST1H2AHQ96KK5 128 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 CCDC115Q96NT0 180 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SLC2A13Q96QE2 648 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 HIST1H2AJQ99878 128 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 TAPBPLQ9BX59 468 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 BRINP2Q9C0B6 783 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 GABARAPL1Q9H0R8 117 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 AIG1Q9NVV5 245 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 PDP1Q9P0J1 537 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 PLEKHB1Q9UF11 243 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 MRTO4Q9UKD2 239 aaKnown RBP11.33□□□□□ -0.6
SHMT2-201ENST00000328923 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF236Q9UL36 1845 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 CDC7O00311 574 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 TXNL1O43396 289 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ANXA9O76027 345 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 AP2A2O94973 939 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 OR4F21O95013 312 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 SDHBP21912 280 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 TAS2R60P59551 318 aa11.33□□□□□ -0.6
SHMT2-201ENST00000328923 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms