RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 OR5P2Q8WZ92 322 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 ZNF764Q96H86 408 aaPredicted RBP17.42■□□□□ 0.38
USP39-201ENST00000323701 AMDHD1Q96NU7 426 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 CSF3RQ99062 836 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 SLC38A3Q99624 504 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 VCX3BQ9H321 246 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 SEMA6CQ9H3T2 930 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 PRMT8Q9NR22 394 aaPredicted RBP17.42■□□□□ 0.38
USP39-201ENST00000323701 OAZ3Q9UMX2 235 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 RNF103-CHMP3A0A140T963 221 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 TMEM229AB2RXF0 380 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 UPK1AO00322 258 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 PROS1P07225 676 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 RAP2AP10114 183 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 CDH3P22223 829 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 ARFIP1P53367 373 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 ARMC6Q6NXE6 501 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 CENPNQ96H22 339 aaPredicted RBP17.42■□□□□ 0.38
USP39-201ENST00000323701 LRCH1Q9Y2L9 728 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 RNF215Q9Y6U7 377 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 TTC28Q96AY4 2481 aa17.42■□□□□ 0.38
USP39-201ENST00000323701 CFAP54Q96N23 3096 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 DPPA5A6NC42 116 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 ACOX3O15254 700 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 LINGO3P0C6S8 592 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 KDELR2P33947 212 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 FEN1P39748 380 aaKnown RBP17.41■□□□□ 0.38
USP39-201ENST00000323701 CTSKP43235 329 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 TSFMP43897 325 aaKnown RBP17.41■□□□□ 0.38
USP39-201ENST00000323701 GSTM5P46439 218 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 RELAQ04206 551 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 ATP6AP1Q15904 470 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 C14orf28Q4W4Y0 310 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 SLC48A1Q6P1K1 146 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 VTCN1Q7Z7D3 282 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 TRIML2Q8N7C3 387 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 OR5T3Q8NGG3 340 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 SLC47A1Q96FL8 570 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 IER2Q9BTL4 223 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 ASPSCR1Q9BZE9 553 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 EHD3Q9NZN3 535 aa17.41■□□□□ 0.38
USP39-201ENST00000323701 FAF1Q9UNN5 650 aaPredicted RBP17.41■□□□□ 0.38
USP39-201ENST00000323701 ZNF682O95780 498 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 UQCRC2P22695 453 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 PPIBP23284 216 aaKnown RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 IST1P53990 364 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 CHRNB3Q05901 458 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 FAM98BQ52LJ0 330 aaKnown RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 LYSMD4Q5XG99 296 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 PMS2CLQ68D20 193 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 TMEM214Q6NUQ4 689 aaKnown RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 CCDC116Q8IYX3 515 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 CBR4Q8N4T8 237 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 C19orf47Q8N9M1 422 aaKnown RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 CAMKVQ8NCB2 501 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 RERGQ96A58 199 aaPredicted RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 ZBED6CLQ96FA7 236 aaPredicted RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 FAIM2Q9BWQ8 316 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 SERHL2Q9H4I8 314 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 PCDHGB5Q9Y5G0 923 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 MAGED1Q9Y5V3 778 aaPredicted RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 LILRA5A6NI73 299 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 MED26O95402 600 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 ALDH4A1P30038 563 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 LIM2P55344 173 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 EEF1A2Q05639 463 aaKnown RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 SAXO2Q658L1 398 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 TBPL2Q6SJ96 375 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 CSNK1A1LQ8N752 337 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 HORMAD2Q8N7B1 307 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 C10orf90Q96M02 699 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 ANKRA2Q9H9E1 313 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 UCK1Q9HA47 277 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 ACSS1Q9NUB1 689 aaPredicted RBP17.4■□□□□ 0.38
USP39-201ENST00000323701 RP1P56715 2156 aa17.4■□□□□ 0.38
USP39-201ENST00000323701 CCDC163A0A0D9SF12 145 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 HRO43593 1189 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 ALOX12P18054 663 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 NCBP2P52298 156 aaKnown RBP eCLIP17.39■□□□□ 0.373e-6■■□□□ 12.2
USP39-201ENST00000323701 FOLH1Q04609 750 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 CSTF1Q05048 431 aaKnown RBP17.39■□□□□ 0.37
USP39-201ENST00000323701 PPP1R8Q12972 351 aaKnown RBP17.39■□□□□ 0.37
USP39-201ENST00000323701 BIRC2Q13490 618 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 TNFAIP8L2Q6P589 184 aaPredicted RBP17.39■□□□□ 0.37
USP39-201ENST00000323701 ERICH5Q6P6B1 374 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 SLC35F3Q8IY50 421 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 ARHGEF39Q8N4T4 335 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 PSMA8Q8TAA3 256 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 EDAQ92838 391 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 NEURL3Q96EH8 262 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 THAP11Q96EK4 314 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 ZNF681Q96N22 645 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 TGM7Q96PF1 710 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 NLNQ9BYT8 704 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 SLC24A3Q9HC58 644 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 OLAHQ9NV23 265 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 CORO2BQ9UQ03 480 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 IGHV5-51A0A0C4DH38 117 aa17.39■□□□□ 0.37
USP39-201ENST00000323701 MYO1GB0I1T2 1018 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms