RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 GTPBP2Q9BX10 602 aaKnown RBP17.07■□□□□ 0.32
PRKCB-202ENST00000321728 SLC23A1Q9UHI7 598 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 LEUTXA8MZ59 168 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 B8ZZF3 427 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 COCHO43405 550 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 PROM1O43490 865 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 GBAP04062 536 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 RAB25P57735 213 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 MAB21L1Q13394 359 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 MRPL58Q14197 206 aaKnown RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ATP13A5Q4VNC0 1218 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 TRIM40Q6P9F5 258 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 FAM20CQ8IXL6 584 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 WBP2Q969T9 261 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 KIAA1143Q96AT1 154 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ASIC4Q96FT7 647 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 SLC6A18Q96N87 628 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ARHGAP39Q9C0H5 1083 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 WASHC1A8K0Z3 465 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 LRRTM2O43300 516 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 SMAD6O43541 496 aaKnown RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 OR10H3O60404 316 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 TBL1XO60907 577 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ASGR1P07306 291 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 MYL12AP19105 171 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 INPP1P49441 399 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 CYP4F8P98187 520 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 DSC1Q08554 894 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ELOAQ14241 798 aaKnown RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ARHGEF6Q15052 776 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF770Q6IQ21 691 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 CELF5Q8N6W0 485 aaKnown RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 OR8H1Q8NGG4 311 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 CIDECQ96AQ7 238 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 UPRTQ96BW1 309 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 KATNB1Q9BVA0 655 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 C1GALT1Q9NS00 363 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 Q9Y3F1 56 aa17.06■□□□□ 0.32
PRKCB-202ENST00000321728 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
PRKCB-202ENST00000321728 SYN3O14994 580 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 LYRM1O43325 122 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 HCN1O60741 890 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 VNN2O95498 520 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 SOAT1P35610 550 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 XKP51811 444 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 RRAS2P62070 204 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-202ENST00000321728 IL18Q14116 193 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 HEPACAMQ14CZ8 416 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 CDKN3Q16667 212 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 CRTC2Q53ET0 693 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-202ENST00000321728 CNIH2Q6PI25 160 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 LAPTM4BQ86VI4 370 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 THOC6Q86W42 341 aaKnown RBP17.05■□□□□ 0.32
PRKCB-202ENST00000321728 OXR1Q8N573 874 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 OR52P1PQ8NH57 321 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 C11orf24Q96F05 449 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-202ENST00000321728 QRFPRQ96P65 431 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 DSPPQ9NZW4 1301 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 OR6C75A6NL08 312 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 ADAP00813 363 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 UBL4AP11441 157 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 LRRC74AQ0VAA2 488 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 P2RY14Q15391 338 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 CCDC85BQ15834 202 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-202ENST00000321728 SLC5A12Q1EHB4 618 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF628Q5EBL2 1059 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 CRB2Q5IJ48 1285 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 IDO2Q6ZQW0 420 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 CAMKMTQ7Z624 323 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 GALNT9Q9HCQ5 603 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 TVP23BQ9NYZ1 205 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 REV1Q9UBZ9 1251 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 VWA8A3KMH1 1905 aa17.05■□□□□ 0.32
PRKCB-202ENST00000321728 LOC102723532A0A0G2JNH3 316 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 FFAR1O14842 300 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TLX2O43763 284 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ORC5O43913 435 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ARSBP15848 533 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 EVI2BP34910 448 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ETV5P41161 510 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ETV1P50549 477 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 AP2S1P53680 142 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 MAPK12P53778 367 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 RPS25P62851 125 aaKnown RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF630Q2M218 657 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 IQCF1Q8N6M8 205 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 OR8J1Q8NGP2 316 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TM9SF2Q99805 663 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TMEM38AQ9H6F2 299 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 CWH43Q9H720 699 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ANGPT4Q9Y264 503 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ARRDC5A6NEK1 342 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 NPIPB15A6NHN6 443 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF30P17039 623 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TNNI3P19429 210 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 POU3F3P20264 500 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms