RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SLAMF1Q13291 335 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.24
TPM1-203ENST00000317516 SULF2Q8IWU5 870 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 OR8K3Q8NH51 312 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 IFT81Q8WYA0 676 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 TANKQ92844 425 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 RBM18Q96H35 190 aaKnown RBP16.52■□□□□ 0.24
TPM1-203ENST00000317516 OR8D2Q9GZM6 311 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 IPPKQ9H8X2 491 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 CHST11Q9NPF2 352 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 COPS7AQ9UBW8 275 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 PHF11Q9UIL8 331 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 TINAGQ9UJW2 476 aa16.52■□□□□ 0.24
TPM1-203ENST00000317516 H0YIV9 168 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 SAP18O00422 153 aaKnown RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 PRRG2O14669 202 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 TFECO14948 347 aaPredicted RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 OR2J2O76002 312 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 ALDOAP04075 364 aaKnown RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 AGAP20933 346 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 GTF2H2Q13888 395 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 GTF2H2CQ6P1K8 395 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 GPR180Q86V85 440 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 ZCCHC7Q8N3Z6 543 aaKnown RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 SLC44A1Q8WWI5 657 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 ATP6V1E2Q96A05 226 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 DGAT2Q96PD7 388 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 FMO2Q99518 471 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 MTERF1Q99551 399 aaKnown RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 FUT8Q9BYC5 575 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 RPF2Q9H7B2 306 aaKnown RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 DMRT3Q9NQL9 472 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 PSD3Q9NYI0 1048 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 CPSF2Q9P2I0 782 aaKnown RBP16.51■□□□□ 0.23
TPM1-203ENST00000317516 TMCO1Q9UM00 188 aa16.51■□□□□ 0.23
TPM1-203ENST00000317516 MYOCOSA0A1B0GUC4 107 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 KRT38O76015 456 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 ACSL3O95573 720 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 CTAGE8P0CG41 777 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 CNTFP26441 200 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 BUD31P41223 144 aaPredicted RBP16.5■□□□□ 0.23
TPM1-203ENST00000317516 CPSF6Q16630 551 aaKnown RBP eCLIP16.5■□□□□ 0.23
TPM1-203ENST00000317516 RNFT1Q5M7Z0 435 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 IL20RBQ6UXL0 311 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 MDGA2Q7Z553 956 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 CTAGE4Q8IX94 777 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 ZFP62Q8NB50 900 aaPredicted RBP16.5■□□□□ 0.23
TPM1-203ENST00000317516 C16orf52Q8NHV5 167 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 SLC2A12Q8TD20 617 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 ANKRD9Q96BM1 317 aaPredicted RBP16.5■□□□□ 0.23
TPM1-203ENST00000317516 ART5Q96L15 291 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 GPR78Q96P69 363 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 CDC42EP4Q9H3Q1 356 aaKnown RBP16.5■□□□□ 0.23
TPM1-203ENST00000317516 LIN28AQ9H9Z2 209 aaKnown RBP16.5■□□□□ 0.23
TPM1-203ENST00000317516 MEMO1Q9Y316 297 aa16.5■□□□□ 0.23
TPM1-203ENST00000317516 ARHGAP10A1A4S6 786 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 TMEM200CA6NKL6 621 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 WWP2O00308 870 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 FOXE1O00358 373 aaPredicted RBP16.49■□□□□ 0.23
TPM1-203ENST00000317516 PRKNO60260 465 aaPredicted RBP16.49■□□□□ 0.23
TPM1-203ENST00000317516 CLDN9O95484 217 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 COL6A2P12110 1019 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 ARL1P40616 181 aaPredicted RBP16.49■□□□□ 0.23
TPM1-203ENST00000317516 STT3AP46977 705 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 RPS13P62277 151 aaKnown RBP16.49■□□□□ 0.23
TPM1-203ENST00000317516 RNF4P78317 190 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 ID2Q02363 134 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 CUL3Q13618 768 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 TSNAXIP1Q2TAA8 658 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 PAOXQ6QHF9 649 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 OPN5Q6U736 354 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 GOLGA7Q7Z5G4 137 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 L3MBTL4Q8NA19 623 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 PSD4Q8NDX1 1056 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 SCYL1Q96KG9 808 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 SGCZQ96LD1 299 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 RASL10BQ96S79 203 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 WDR41Q9HAD4 459 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 DMGDHQ9UI17 866 aaKnown RBP16.49■□□□□ 0.23
TPM1-203ENST00000317516 MYO7BQ6PIF6 2116 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 TEX15Q9BXT5 2789 aa16.49■□□□□ 0.23
TPM1-203ENST00000317516 CENPEQ02224 2701 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 PLPP1O14494 284 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 FGF17O60258 216 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 SMIM24O75264 130 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 HTR1EP28566 365 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 PTGS2P35354 604 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 HK2P52789 917 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 GPR85P60893 370 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 IGLV3-21P80748 117 aaPredicted RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 PLIN5Q00G26 463 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 TECRLQ5HYJ1 363 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 C10orf62Q5T681 223 aaPredicted RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 LGSNQ5TDP6 509 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 CYP20A1Q6UW02 462 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 C16orf47Q6ZP98 133 aaPredicted RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 OR4N5Q8IXE1 308 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms