RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ZNF160Q9HCG1 818 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 NECTIN3Q9NQS3 549 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 PRTFDC1Q9NRG1 225 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 SEMA3GQ9NS98 782 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 TEX10Q9NXF1 929 aaPredicted RBP7.39□□□□□ -1.23
CDC42-201ENST00000315554 KCMF1Q9P0J7 381 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 VPS29Q9UBQ0 182 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 TRAF6Q9Y4K3 522 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 ATG4BQ9Y4P1 393 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 DNAJC15Q9Y5T4 150 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 CACNA1BQ00975 2339 aa7.39□□□□□ -1.23
CDC42-201ENST00000315554 A0A1W2PR48 441 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 A6NJY4 79 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 TMEM114B3SHH9 223 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 CYR61O00622 381 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 SIAH2O43255 324 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 PRMT3O60678 531 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 LDB3O75112 727 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 SEMA3DO95025 777 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 SCELO95171 688 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 IGHEP01854 428 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 JUNP05412 331 aaKnown RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 FAM58BPP0C7Q3 252 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 FAM87AP0C7U9 286 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 COX6A1P12074 109 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 ACPPP15309 386 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 JAK1P23458 1154 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 PPP2R2AP63151 447 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 RAE1P78406 368 aaKnown RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 SLC13A2Q13183 592 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 NSDHLQ15738 373 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 PDCD2Q16342 344 aaPredicted RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 LINC00303Q3SY05 128 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 UGT3A2Q3SY77 523 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 TUBB8Q3ZCM7 444 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 SFT2D3Q587I9 215 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 BORAQ6PGQ7 559 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 ANKRD37Q7Z713 158 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 GPR180Q86V85 440 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 CLYBLQ8N0X4 340 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 GBP7Q8N8V2 638 aaPredicted RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 OR11G2Q8NGC1 345 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 PRR7Q8TB68 274 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 CHTF18Q8WVB6 975 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 ARHGAP9Q9BRR9 750 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 ING2Q9H160 280 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 ACBD3Q9H3P7 528 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 DDX31Q9H8H2 851 aaKnown RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 BRF2Q9HAW0 419 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 LYRM4Q9HD34 91 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 PNPOQ9NVS9 261 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 PSD3Q9NYI0 1048 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 AHSPQ9NZD4 102 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 C5AR2Q9P296 337 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 MARCOQ9UEW3 520 aaPredicted RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 POLR3HQ9Y535 204 aaPredicted RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 ASB4Q9Y574 426 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 KCNMB2Q9Y691 235 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 SCN2AQ99250 2005 aa7.38□□□□□ -1.23
CDC42-201ENST00000315554 KMT2BQ9UMN6 2715 aaPredicted RBP7.38□□□□□ -1.23
CDC42-201ENST00000315554 LAMA5O15230 3695 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 ATP6AP2A0A1C7CYW4 349 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 A0A1W2PS29 197 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 H3BQF6 201 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 PCDH7O60245 1069 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 FGF17O60258 216 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 SEC22BO75396 215 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 ATP6AP2O75787 350 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 AIFM1O95831 613 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 CHEK2O96017 543 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 KITP10721 976 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 HSD3B1P14060 373 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 NR1D1P20393 614 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 IL10P22301 178 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 GRK2P25098 689 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 SERPINB5P36952 375 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 MAPK12P53778 367 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 SLC18A1P54219 525 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 POLE2P56282 527 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 OR4D2P58180 307 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 TNFRSF17Q02223 184 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 ACTN3Q08043 901 aaPredicted RBP7.37□□□□□ -1.23
CDC42-201ENST00000315554 ACSM2AQ08AH3 577 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 Q0VFX4 171 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 LY6DQ14210 128 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 PCOLCEQ15113 449 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 NR6A1Q15406 480 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 ZNF750Q32MQ0 723 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 GALNTL6Q49A17 601 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 CRTC2Q53ET0 693 aaPredicted RBP7.37□□□□□ -1.23
CDC42-201ENST00000315554 DCAF10Q5QP82 559 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 C10orf62Q5T681 223 aaPredicted RBP7.37□□□□□ -1.23
CDC42-201ENST00000315554 ACSM2BQ68CK6 577 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 MRM1Q6IN84 353 aaKnown RBP7.37□□□□□ -1.23
CDC42-201ENST00000315554 FAM180BQ6P0A1 224 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 TMEM205Q6UW68 189 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 Q6ZSR9 355 aa7.37□□□□□ -1.23
CDC42-201ENST00000315554 CPEB2Q7Z5Q1 589 aaKnown RBP7.37□□□□□ -1.23
CDC42-201ENST00000315554 SCUBE1Q8IWY4 988 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms