RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NPRL3Q12980 569 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TMC8Q8IU68 726 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.465e-8■■■□□ 18.5
PRKDC-201ENST00000314191 GPR174Q9BXC1 333 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 IKZF2Q9UKS7 526 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 MGAT4BQ9UQ53 548 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 VEZF1Q14119 521 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 AMZ1Q400G9 498 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 HENMT1Q5T8I9 393 aaKnown RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ADNP2Q6IQ32 1131 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TBPL2Q6SJ96 375 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 C12orf40Q86WS4 652 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ENKURQ8TC29 256 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 GDE1Q9NZC3 331 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ANKMY1Q9P2S6 941 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 PHF11Q9UIL8 331 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 CLEC4AQ9UMR7 237 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 DOCK2Q92608 1830 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 MYH13Q9UKX3 1938 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 EMC8O43402 210 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 KLK8O60259 260 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 CSTF2P33240 577 aaKnown RBP eCLIP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ZNF267Q14586 743 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 SLC36A3Q495N2 470 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 RNASE12Q5GAN4 147 aaKnown RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 FIGLAQ6QHK4 219 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ZNF765Q7L2R6 523 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ZNF300Q96RE9 604 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 MCOLN1Q9GZU1 580 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 DCSTAMPQ9H295 470 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TMEM45AQ9NWC5 275 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 SLC25A12O75746 678 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 OR5F1O95221 314 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 LSAMPQ13449 338 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 CBLL1Q75N03 491 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 COX4I2Q96KJ9 171 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 FAM83CQ9BQN1 747 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TMEM121BQ9BXQ6 578 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 MS4A12Q9NXJ0 267 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 UGDHO60701 494 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 REM1O75628 298 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 HBA1P69905 142 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 ZNF33BQ06732 778 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 IRF4Q15306 451 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 CEP68Q76N32 757 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TRIM46Q7Z4K8 759 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TMEM150AQ86TG1 271 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 OR4K5Q8NGD3 323 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 C5orf34Q96MH7 638 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 LYSMD1Q96S90 227 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 PELI2Q9HAT8 420 aa5.9□□□□□ -1.46
PRKDC-201ENST00000314191 TEX10Q9NXF1 929 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 COL5A3P25940 1745 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-201ENST00000314191 SLC5A10A0PJK1 596 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 DAPL1A0PJW8 107 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 H0YIV9 168 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 APOL3O95236 402 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 IFI30P13284 250 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 STT3AP46977 705 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 C9orf50Q5SZB4 431 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 OR56A1Q8NGH5 318 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 WDR12Q9GZL7 423 aaKnown RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 THAP10Q9P2Z0 257 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 MALT1Q9UDY8 824 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 SLC30A4O14863 429 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 CTSLP07711 333 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 B4GALNT1Q00973 533 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 PYDC2Q56P42 97 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 DLEU7Q6UYE1 221 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 Q6ZPB1 254 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 MSANTD1Q6ZTZ1 278 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 RLN3Q8WXF3 142 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 UHRF1Q96T88 793 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 CA14Q9ULX7 337 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 M0R3H8 397 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 ZNF821O75541 412 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 SEMA4FO95754 770 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 PVRP15151 417 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 ST3GAL4Q11206 333 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 GGTA1PQ4G0N0 100 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 PARM1Q6UWI2 310 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 GPR149Q86SP6 731 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 CIDECQ96AQ7 238 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 POLE3Q9NRF9 147 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 TRNAU1APQ9NX07 287 aaKnown RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 ZNF624Q9P2J8 865 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 TRBV5-4A0A0C4DH59 114 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 CLCN2P51788 898 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 PIN1Q13526 163 aaPredicted RBP5.9□□□□□ -1.47
PRKDC-201ENST00000314191 TAB1Q15750 504 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 LUZP2Q86TE4 346 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 DPYSL5Q9BPU6 564 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 J3KTA2 159 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 SLC22A1O15245 554 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 GPNMBQ14956 572 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 NNATQ16517 81 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 ANKRD54Q6NXT1 300 aa5.9□□□□□ -1.47
PRKDC-201ENST00000314191 SLC30A6Q6NXT4 461 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms