RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ERVK-11Q9UQG0 969 aa7.58□□□□□ -1.2
TPM3-203ENST00000312970 CLDN16Q9Y5I7 305 aa7.58□□□□□ -1.2
TPM3-203ENST00000312970 NCOA6Q14686 2063 aaPredicted RBP7.58□□□□□ -1.2
TPM3-203ENST00000312970 FAM187AA6NFU0 413 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TMEM200CA6NKL6 621 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 A8MVJ9 347 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CXorf49A8MYA2 514 aaPredicted RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 C19orf84I3L1E1 186 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 EIF3HO15372 352 aaKnown RBP eCLIP7.57□□□□□ -1.2
TPM3-203ENST00000312970 PHGDHO43175 533 aaKnown RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 HS6ST1O60243 411 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CDC40O60508 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
TPM3-203ENST00000312970 PRAMEF4O60810 478 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 OR2J2O76002 312 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TBX6O95947 436 aaPredicted RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 IL2RAP01589 272 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PF4P02776 101 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TUBB4AP04350 444 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TPOP07202 933 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 GSTA2P09210 222 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CD1DP15813 335 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TNNI3P19429 210 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TFEBP19484 476 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PPP2R1BP30154 601 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 SSTR2P30874 369 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PTGER1P34995 402 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 RFC3P40938 356 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CASP2P42575 452 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 KCNC1P48547 511 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 HSPA7P48741 367 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 HNRNPFP52597 415 aaKnown RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 IRF8Q02556 426 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 STX4Q12846 297 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CALCOCO2Q13137 446 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CHIT1Q13231 466 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CDSNQ15517 529 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 OR4D1Q15615 310 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TBCCQ15814 346 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PDK4Q16654 411 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 FBXO48Q5FWF7 155 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PAGE2BQ5JRK9 111 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PRAMEF9Q5VWM5 478 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TMEM211Q6ICI0 200 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PAOXQ6QHF9 649 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 IL20RBQ6UXL0 311 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 HSDL2Q6YN16 418 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 NCCRP1Q6ZVX7 275 aaPredicted RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 CHSY3Q70JA7 882 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 MAATS1Q7Z4T9 603 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 VN1R5Q7Z5H4 357 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 FGD2Q7Z6J4 655 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CLNKQ7Z7G1 428 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 GALNT12Q8IXK2 581 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 GPALPP1Q8IXQ4 340 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 ZNF295-AS1Q8N0V1 137 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 SNX31Q8N9S9 440 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 FAM47BQ8NA70 645 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 MORN4Q8NDC4 146 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 STAG3L4Q8TBR4 150 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 PTPMT1Q8WUK0 201 aaPredicted RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 ASB15Q8WXK1 588 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 RHOVQ96L33 236 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 UBXN10Q96LJ8 280 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 LURAP1Q96LR2 239 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 KCNC2Q96PR1 638 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 F2RL3Q96RI0 385 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 GPR22Q99680 433 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 RBBP8Q99708 897 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TMEM79Q9BSE2 394 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TBCDQ9BTW9 1192 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 TRIM8Q9BZR9 551 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 CD244Q9BZW8 370 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 DEFB127Q9H1M4 99 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 COPS7BQ9H9Q2 264 aaPredicted RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 LIN28AQ9H9Z2 209 aaKnown RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 LYRM4Q9HD34 91 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 SAYSD1Q9NPB0 183 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 HPF1Q9NWY4 346 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 WHRNQ9P202 907 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 MYOTQ9UBF9 498 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 ZNF223Q9UK11 482 aaPredicted RBP7.57□□□□□ -1.2
TPM3-203ENST00000312970 ITGB1BP2Q9UKP3 347 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 RNF112Q9ULX5 631 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 ABCA2Q9BZC7 2435 aa7.57□□□□□ -1.2
TPM3-203ENST00000312970 MYOCOSA0A1B0GUC4 107 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 TCRBV9S1A1TA0A576 114 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 FAM159BA6NKW6 160 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 WWP2O00308 870 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 PRKNO60260 465 aaPredicted RBP7.56□□□□□ -1.2
TPM3-203ENST00000312970 CCNT2O60583 730 aaKnown RBP7.56□□□□□ -1.2
TPM3-203ENST00000312970 PDE9AO76083 593 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 CAPN3P20807 821 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 CNR1P21554 472 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 CERS1P27544 350 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 SPRP35270 261 aaPredicted RBP7.56□□□□□ -1.2
TPM3-203ENST00000312970 GP5P40197 560 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 GPR85P60893 370 aa7.56□□□□□ -1.2
TPM3-203ENST00000312970 RAB10P61026 200 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms