RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SERPINA7P05543 415 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 PLA2G2AP14555 144 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 JAK1P23458 1154 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 SOX18P35713 384 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 SOX8P57073 446 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 DNAJB13P59910 316 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF33BQ06732 778 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 CFAP157Q5JU67 520 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 KBTBD2Q8IY47 623 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 METTL4Q8N3J2 472 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 LSM14AQ8ND56 463 aaKnown RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 IP6K3Q96PC2 410 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 NPLQ9BXD5 320 aaPredicted RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 IQCGQ9H095 443 aaKnown RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 KCNK9Q9NPC2 374 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 RIC8BQ9NVN3 520 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 HEY2Q9UBP5 337 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 TSC22D4Q9Y3Q8 395 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 CCL27Q9Y4X3 112 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 POLR3HQ9Y535 204 aaPredicted RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ATP6AP2A0A1C7CYW4 349 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 TMEM200CA6NKL6 621 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ZNHIT1O43257 154 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 CTIFO43310 598 aaKnown RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ULK1O75385 1050 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ATP6AP2O75787 350 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 BPGMP07738 259 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 CT62P0C5K7 136 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 LINC00032P0C843 101 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 GPR143P51810 404 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 NR0B1P51843 470 aaKnown RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 WDR4P57081 412 aaKnown RBP11.25□□□□□ -0.61
SCFD1-201ENST00000311943 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 CCNYL2Q5T2Q4 361 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 VWA5B1Q5TIE3 1220 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 PLAG1Q6DJT9 500 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 BEST3Q8N1M1 668 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 NACC2Q96BF6 587 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 TM4SF18Q96CE8 201 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 REPS1Q96D71 796 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 EGLN2Q96KS0 407 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 C3orf30Q96M34 536 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 AGAP4Q96P64 663 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 SIGLEC12Q96PQ1 595 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 LPAR4Q99677 370 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 TUBB6Q9BUF5 446 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 KCNK13Q9HB14 408 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 ZDHHC2Q9UIJ5 367 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 SNX6Q9UNH7 406 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 DNAJC15Q9Y5T4 150 aa11.25□□□□□ -0.61
SCFD1-201ENST00000311943 CTNSO60931 367 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 SASH3O75995 380 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 MLYCDO95822 493 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 TACR1P25103 407 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 SOX11P35716 441 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 SERPINB4P48594 390 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 MAGOHP61326 146 aaKnown RBP11.24□□□□□ -0.61
SCFD1-201ENST00000311943 UGT3A2Q3SY77 523 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 NDUFAF5Q5TEU4 345 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 SPINK14Q6IE38 97 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 CYP20A1Q6UW02 462 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 Q6ZSR9 355 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 NUDT13Q86X67 352 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 ZCCHC7Q8N3Z6 543 aaKnown RBP11.24□□□□□ -0.61
SCFD1-201ENST00000311943 CISD2Q8N5K1 135 aaKnown RBP11.24□□□□□ -0.61
SCFD1-201ENST00000311943 OR6Y1Q8NGX8 325 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 ELP5Q8TE02 316 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 CHTF18Q8WVB6 975 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 NCLNQ969V3 563 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 SERPINI1Q99574 410 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 PAIP2Q9BPZ3 127 aaKnown RBP11.24□□□□□ -0.61
SCFD1-201ENST00000311943 OR8D2Q9GZM6 311 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 CDCP1Q9H5V8 836 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 LYRM4Q9HD34 91 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 STMN3Q9NZ72 180 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 VPS29Q9UBQ0 182 aa11.24□□□□□ -0.61
SCFD1-201ENST00000311943 HELZ2Q9BYK8 2649 aaKnown RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 SAGE2PA6NJ88 616 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 BGNP21810 368 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 FEN1P39748 380 aaKnown RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 HSD17B7P56937 341 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 PMP22Q01453 160 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 STX4Q12846 297 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 KLRB1Q12918 225 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 LTB4RQ15722 352 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 SPDYAQ5MJ70 313 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF227Q86WZ6 799 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 ZNF595Q8IYB9 648 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 CDC26Q8NHZ8 85 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 DNAJB14Q8TBM8 379 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 RDH11Q8TC12 318 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 TMBIM4Q9HC24 238 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 EXO1Q9UQ84 846 aaKnown RBP11.23□□□□□ -0.61
SCFD1-201ENST00000311943 DLGAP4Q9Y2H0 992 aa11.23□□□□□ -0.61
SCFD1-201ENST00000311943 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms