RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 UGT8Q16880 541 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 COL28A1Q2UY09 1125 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 CRTC2Q53ET0 693 aaPredicted RBP17.23■□□□□ 0.35
SPSB4-201ENST00000310546 CLLU1Q5K131 121 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 DDX53Q86TM3 631 aaKnown RBP17.23■□□□□ 0.35
SPSB4-201ENST00000310546 ADGRG3Q86Y34 549 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 STK40Q8N2I9 435 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 SYNPOQ8N3V7 929 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 RNF175Q8N4F7 328 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 OR11H7Q8NGC8 314 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 CHTF18Q8WVB6 975 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 USP7Q93009 1102 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 NMUR1Q9HB89 426 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 GBF1Q92538 1859 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 MPZL2O60487 215 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 MPC2O95563 127 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 CFDP00746 253 aaPredicted RBP17.23■□□□□ 0.35
SPSB4-201ENST00000310546 HLA-DQB1P01920 261 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 EBLN1P0CF75 366 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 COX7A2P14406 83 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 B2MP61769 119 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 SF3A2Q15428 464 aaKnown RBP17.23■□□□□ 0.35
SPSB4-201ENST00000310546 ZNF730Q6ZMV8 503 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 SCN4BQ8IWT1 228 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 FAM46DQ8NEK8 389 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 OR4C15Q8NGM1 316 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 IGSF8Q969P0 613 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 KLHL15Q96M94 604 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 LINC00052Q96N35 136 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 SORCS2Q96PQ0 1159 aa17.23■□□□□ 0.35
SPSB4-201ENST00000310546 MS4A7Q9GZW8 240 aaPredicted RBP17.23■□□□□ 0.35
SPSB4-201ENST00000310546 CASKO14936 926 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 PCDH7O60245 1069 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 GASTP01350 101 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 OR1E1P30953 314 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 NNMTP40261 264 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 GBX2P52951 348 aaPredicted RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 CRISP1P54107 249 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 NDUFAF5Q5TEU4 345 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 BICRALQ6AI39 1079 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 PTRHD1Q6GMV3 140 aaKnown RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 BHLHB9Q6PI77 547 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 CREB3L1Q96BA8 519 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 FOLH1BQ9HBA9 442 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 PRM3Q9NNZ6 103 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 DIMT1Q9UNQ2 313 aaKnown RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 DHRS7Q9Y394 339 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 CLDN9O95484 217 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 SYPP08247 313 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 IGFBP1P08833 259 aaPredicted RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 CXCL3P19876 107 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 SMSP52788 366 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 MLLT11Q13015 90 aaPredicted RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 TUSC1Q2TAM9 212 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 SYT12Q8IV01 421 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 NAGSQ8N159 534 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 NANOGP1Q8N7R0 232 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 TTLQ8NG68 377 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 RBP7Q96R05 134 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 FERD3LQ96RJ6 166 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 FAM126AQ9BYI3 521 aaPredicted RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 LATS2Q9NRM7 1088 aa17.22■□□□□ 0.35
SPSB4-201ENST00000310546 TDRD15B5MCY1 1934 aaKnown RBP17.22■□□□□ 0.35
SPSB4-201ENST00000310546 WASH4PA8MWX3 477 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 NCR1O76036 304 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 LPOP22079 712 aaPredicted RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 PPP3R1P63098 170 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 IL10RBQ08334 325 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 TAF1AQ15573 450 aaPredicted RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 TCTN1Q2MV58 587 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 MS4A13Q5J8X5 152 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 ATAT1Q5SQI0 421 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 METTL2BQ6P1Q9 378 aaKnown RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 WDR53Q7Z5U6 358 aaPredicted RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 LUZP2Q86TE4 346 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 ZNF578Q96N58 590 aaPredicted RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 MAPKAP1Q9BPZ7 522 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 WASH6PQ9NQA3 447 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 TMEM248Q9NWD8 314 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 A0A1W2PQH9 124 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 ZAR1LA6NP61 321 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 TLR4O00206 839 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 QSOX1O00391 747 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 YY2O15391 372 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 GCM2O75603 506 aaPredicted RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 APOL3O95236 402 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 HRGP04196 525 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 STOMP27105 288 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 STK19P49842 368 aaPredicted RBP17.21■□□□□ 0.35
SPSB4-201ENST00000310546 CLLU1OSQ5K130 101 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 TRILQ7L0X0 811 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 SCD5Q86SK9 330 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 LINC00518Q8N0U6 118 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 CLDN19Q8N6F1 224 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 OR8K5Q8NH50 307 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 SLC9A6Q92581 669 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms