RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 FAM124AQ86V42 546 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 ACBD7Q8N6N7 88 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 FIZ1Q96SL8 496 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 OR51B5Q9H339 312 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 AP1M2Q9Y6Q5 423 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 EIF3FO00303 357 aaPredicted RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 CHDHQ8NE62 594 aaPredicted RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 JPH3Q8WXH2 748 aaPredicted RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 SECISBP2Q96T21 854 aaKnown RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 RNF39Q9H2S5 420 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 LHCGRP22888 699 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CYP4V2Q6ZWL3 525 aaPredicted RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 ZNF550Q7Z398 422 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 HIST1H2AAQ96QV6 131 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 A0A1B0GVI7 797 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 EIF1AYO14602 144 aaKnown RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 GMFGO60234 142 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CKMT1AP12532 417 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CD9P21926 228 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 EIF1AXP47813 144 aaKnown RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 SEMG2Q02383 582 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 RASGEF1AQ8N9B8 481 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 Q9N2J8 555 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 POP7O75817 140 aaKnown RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 GBAP04062 536 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CBFBQ13951 182 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 SYNPOQ8N3V7 929 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 SUN3Q8TAQ9 357 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 MYNNQ9NPC7 610 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 ACSL5Q9ULC5 683 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 TCRBV3S1A0A5B6 114 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 MTNR1AP48039 350 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CAPZA1P52907 286 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
SNED1-201ENST00000310397 AVL9Q8NBF6 648 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 SLC38A3Q99624 504 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 CACNG4Q9UBN1 327 aa12.65□□□□□ -0.38
SNED1-201ENST00000310397 SLC22A31A6NKX4 558 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 CCKBRP32239 447 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 CRISP1P54107 249 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.39
SNED1-201ENST00000310397 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 LRR1Q96L50 414 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 ATPIF1Q9UII2 106 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 PCDHB14Q9Y5E9 798 aa12.65□□□□□ -0.39
SNED1-201ENST00000310397 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 A0A0G2JN53 185 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 C13orf42A0A1B0GVH6 325 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 HOXD12P35452 270 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 IGFN1Q86VF2 1251 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 TSNAXQ99598 290 aaKnown RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 DPEP2Q9H4A9 486 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 ACOT13Q9NPJ3 140 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 SERINC1Q9NRX5 453 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 JUPP14923 745 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 MAPK15Q8TD08 544 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 MSRAQ9UJ68 235 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 SLC45A1Q9Y2W3 748 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 SMIM30A4D0T7 59 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 CDC40O60508 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNED1-201ENST00000310397 MTX2O75431 263 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 CEACAM19Q7Z692 300 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 IL12RB2Q99665 862 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 ZFR2Q9UPR6 939 aaKnown RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 INHBCP55103 352 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 OR2L8Q8NGY9 312 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 ZNF304Q9HCX3 659 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 A0A0D9SEW6 157 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 SLC31A1O15431 190 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 KCT2Q8NC54 265 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 ZNF486Q96H40 463 aaPredicted RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 MCHR1Q99705 422 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 TP63Q9H3D4 680 aaPredicted RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 RIMS3Q9UJD0 308 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 FARSAQ9Y285 508 aaKnown RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 PCDH17O14917 1159 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 MPC1LP0DKB6 136 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 ZNF252P-AS1Q0IIN9 211 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 PTPRCAPQ14761 206 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 OR4D1Q15615 310 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 TEX26Q8N6G2 289 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 OR52B6Q8NGF0 335 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 SH3YL1Q96HL8 342 aaPredicted RBP12.64□□□□□ -0.39
SNED1-201ENST00000310397 TMEM175Q9BSA9 504 aa12.64□□□□□ -0.39
SNED1-201ENST00000310397 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
SNED1-201ENST00000310397 FHP07954 510 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 CDKL4Q5MAI5 379 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GTF2IRD2BQ6EKJ0 949 aa12.63□□□□□ -0.39
SNED1-201ENST00000310397 GTF2IRD2Q86UP8 949 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms