RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SLC35F1Q5T1Q4 408 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 OTOP2Q7RTS6 562 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 PHC2Q8IXK0 858 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 DCAF4L2Q8NA75 395 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 SYT14Q8NB59 555 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 FOPNLQ96NB1 174 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM245Q9H330 911 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 MCUBQ9NWR8 336 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 ALG5Q9Y673 324 aa10.65□□□□□ -0.71
PTPN7-201ENST00000309017 OSMP13725 252 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 CBLP22681 906 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 CRYBB2P43320 205 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MAPK8P45983 427 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 XCR1P46094 333 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 DSTNP60981 165 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TEKQ02763 1124 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 EFR3AQ14156 821 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 SNAPC1Q16533 368 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 CEACAM20Q6UY09 585 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TPRG1Q6ZUI0 275 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 RTN4RL1Q86UN2 441 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 SCAMP4Q969E2 229 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TM9SF2Q99805 663 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MKRN2Q9H000 416 aaKnown RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MAT2BQ9NZL9 334 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 ISM1B1AKI9 464 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 RNASET2O00584 256 aaKnown RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 ADAM12O43184 909 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF780AO75290 641 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 NME6O75414 186 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 HBQ1P09105 142 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 B4GALNT1Q00973 533 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MEF2AQ02078 507 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 OR2G6Q5TZ20 316 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MED27Q6P2C8 311 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 FAM109AQ8N4B1 249 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 OR8J1Q8NGP2 316 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 GATAD2BQ8WXI9 593 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 RAB8BQ92930 207 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 WACQ9BTA9 647 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 RETREG1Q9H6L5 497 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TBC1D17Q9HA65 648 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 THSD1Q9NS62 852 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 NDRG2Q9UN36 371 aaKnown RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 PCDHB7Q9Y5E2 793 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 PRAMEF25A6NGN4 478 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 ORC5O43913 435 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 STK19P49842 368 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 DOC2BQ14184 412 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MEDAGQ5VYS4 303 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 PDZD3Q86UT5 571 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TIGD4Q8IY51 512 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF557Q8N988 423 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-201ENST00000309017 LMNTD1Q8N9Z9 388 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 SLC25A46Q96AG3 418 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 TAPBPLQ9BX59 468 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 ACOXLQ9NUZ1 547 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 FTSJ1Q9UET6 329 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
PTPN7-201ENST00000309017 MKI67P46013 3256 aaKnown RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 IQCMA0A1B0GVH7 501 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM189-UBE2V1I3L0A0 370 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 BTN3A3O00478 584 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 POLR1CO15160 346 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 IGHA2P01877 340 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 KLK1P06870 262 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 H1F0P07305 194 aaKnown RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SLC11A1P49279 550 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 MLLT11Q13015 90 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 CCSMST1Q4G0I0 132 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 CNIH2Q6PI25 160 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SHFQ7M4L6 423 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 C2orf69Q8N8R5 385 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SLC37A3Q8NCC5 494 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 PROKR2Q8NFJ6 384 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 ZFAND1Q8TCF1 268 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 CREB3L4Q8TEY5 395 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 LRR1Q96L50 414 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 DNAH14Q0VDD8 3507 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 LOC102723532A0A0G2JNH3 316 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 ARHGEF33A8MVX0 844 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 LRRTM2O43300 516 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 CELF2O95319 508 aaKnown RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SLC16A8O95907 504 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 ADAP00813 363 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 IL1AP01583 271 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 WEE1P30291 646 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SNRPD1P62314 119 aaKnown RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SP140Q13342 867 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 HIST2H2AA3Q6FI13 130 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 TAS1R1Q7RTX1 841 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 COMMD6Q7Z4G1 85 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 DTX3Q8N9I9 347 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 WDR20Q8TBZ3 569 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms