RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KRT75O95678 551 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 SEMG1P04279 462 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 NTRK1P04629 796 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 NUDT7P0C024 238 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 SLC35G6P0C7Q6 338 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 SMIM10L1P0DMW3 83 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 BCKDHBP21953 392 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 MAOBP27338 520 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 CERS1P27544 350 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 MAGEA2P43356 314 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 FASLGP48023 281 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 CXCL12P48061 93 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 LSSP48449 732 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 NXPH1P58417 271 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 RBBP4Q09028 425 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 TEAD4Q15561 434 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 GCNT6Q5T4J0 391 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 RNF44Q7L0R7 432 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 OOSP2Q86WS3 158 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 CBR4Q8N4T8 237 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 C11orf65Q8NCR3 313 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 DNASE2BQ8WZ79 361 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 EXOSC8Q96B26 276 aaKnown RBP11.26□□□□□ -0.61
TRIM40-205ENST00000307859 ZBED6CLQ96FA7 236 aaPredicted RBP11.26□□□□□ -0.61
TRIM40-205ENST00000307859 SMIM10Q96HG1 83 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 FCRL4Q96PJ5 515 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 OSBPL11Q9BXB4 747 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 ASPSCR1Q9BZE9 553 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 TMEM38AQ9H6F2 299 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 UCK1Q9HA47 277 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 C1GALT1Q9NS00 363 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 SIRT3Q9NTG7 399 aaPredicted RBP11.26□□□□□ -0.61
TRIM40-205ENST00000307859 HRASLS2Q9NWW9 162 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 LYARQ9NX58 379 aaKnown RBP11.26□□□□□ -0.61
TRIM40-205ENST00000307859 ZSCAN32Q9NX65 697 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 DNAJB9Q9UBS3 223 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 RPS6KA6Q9UK32 745 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 NINQ8N4C6 2090 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 RNF103-CHMP3A0A140T963 221 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 MAGEA13PA6NCF6 341 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 TXNDC9O14530 226 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 VILLO15195 856 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 P2RX6O15547 441 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 LRP3O75074 770 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 ETFAP13804 333 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 SOAT1P35610 550 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 CHI3L1P36222 383 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 PI4KAP42356 2102 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 CRYBA2P53672 197 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 MANFP55145 182 aaKnown RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 RAB8AP61006 207 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 MRPS35P82673 323 aaKnown RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 EEF1A2Q05639 463 aaKnown RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 SIM2Q14190 667 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 LRRC23Q53EV4 343 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 SAXO2Q658L1 398 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 CBLL1Q75N03 491 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 EIF3MQ7L2H7 374 aaKnown RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 C17orf82Q86X59 251 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 GKN2Q86XP6 184 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 KCT2Q8NC54 265 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 OR5AK3PQ8NH89 298 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 UTP15Q8TED0 518 aaKnown RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 RSC1A1Q92681 617 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 UCN3Q969E3 161 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 NEURL3Q96EH8 262 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 ZFYVE21Q9BQ24 234 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 NLNQ9BYT8 704 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 ROGDIQ9GZN7 287 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 SLC35C2Q9NQQ7 365 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 C5AR2Q9P296 337 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 GMEB2Q9UKD1 530 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 UTS2RQ9UKP6 389 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 POMT2Q9UKY4 750 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 FAF1Q9UNN5 650 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-205ENST00000307859 ATG4BQ9Y4P1 393 aa11.25□□□□□ -0.61
TRIM40-205ENST00000307859 A0A0J9YVX5 310 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 PDLIM1O00151 329 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 DLGAP1O14490 977 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 LAMTOR5O43504 91 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 AIFM1O95831 613 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF888P0CJ79 500 aaPredicted RBP11.24□□□□□ -0.61
TRIM40-205ENST00000307859 CRATP43155 626 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 MAZP56270 477 aaKnown RBP11.24□□□□□ -0.61
TRIM40-205ENST00000307859 PDK3Q15120 406 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF630Q2M218 657 aaPredicted RBP11.24□□□□□ -0.61
TRIM40-205ENST00000307859 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 C6orf52Q5T4I8 152 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 FAM180BQ6P0A1 224 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF761Q86XN6 746 aaPredicted RBP11.24□□□□□ -0.61
TRIM40-205ENST00000307859 RNF130Q86XS8 419 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
TRIM40-205ENST00000307859 SDR16C5Q8N3Y7 309 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 CAMKVQ8NCB2 501 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 LMX1AQ8TE12 382 aa11.24□□□□□ -0.61
TRIM40-205ENST00000307859 TMBIM1Q969X1 311 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms