RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 WASH3PC4AMC7 463 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 GRIA2P42262 883 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SOX2P48431 317 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OCLNQ16625 522 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 WASH2PQ6VEQ5 465 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 UBE2Q1Q7Z7E8 422 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OR2L2Q8NH16 312 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SMOXQ9NWM0 555 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 STC2O76061 302 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 OAZ2O95190 189 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 LCN1P31025 176 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-201ENST00000303531 WNT7BP56706 349 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 KCTD9Q7L273 389 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 SERINC5Q86VE9 423 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 DEFB119Q8N690 84 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 RFT1Q96AA3 541 aa13.38□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF840PA6NDX5 716 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GABRA3P34903 492 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 VSX2P58304 361 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 NPRL3Q12980 569 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 TMEM130Q8N3G9 435 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 FAM86B1Q8N7N1 296 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GAL3ST3Q96A11 431 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 TEPSINQ96N21 525 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 SMURF1Q9HCE7 757 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GON4LQ3T8J9 2241 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 INMT-MINDY4F8WBC2 141 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 CDC123O75794 336 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 DNAJB5O75953 348 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 KCNC1P48547 511 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GNG2P59768 71 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 PIGGQ5H8A4 983 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF550Q7Z398 422 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 HSPA12BQ96MM6 686 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 IL17FQ96PD4 163 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 B3GAT2Q9NPZ5 323 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 MTMR10Q9NXD2 777 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 RPS26P62854 115 aaKnown RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 E2F1Q01094 437 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 PLGLB1Q02325 96 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 TBRG1Q3YBR2 411 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GATSQ8NAP1 163 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 TMEM41AQ96HV5 264 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 CMKLR1Q99788 373 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF696Q9H7X3 374 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 PIM1P11309 404 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 EIF5AL1Q6IS14 154 aaKnown RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 ZFR2Q9UPR6 939 aaKnown RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 SH2B3Q9UQQ2 575 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 UNC119BA6NIH7 251 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■■■ 35.1
PRKCB-201ENST00000303531 GRIK2Q13002 908 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 GRK1Q15835 563 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 CES4AQ5XG92 561 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 ASPGQ86U10 573 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 JPH3Q8WXH2 748 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 SECISBP2Q96T21 854 aaKnown RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 TEX13DA0A0J9YY54 714 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 K7ERQ8 282 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 MUSKO15146 869 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 DENRO43583 198 aaKnown RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 RHOP08100 348 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 C18orf21Q32NC0 220 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 PNPLA2Q96AD5 504 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 MMABQ96EY8 250 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 F2RL3Q96RI0 385 aa13.37□□□□□ -0.27
PRKCB-201ENST00000303531 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-201ENST00000303531 HLCSP50747 726 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 BTBD16Q32M84 506 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 LGALS12Q96DT0 336 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 OR2M4Q96R27 311 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 SCP2D1Q9UJQ7 156 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 STSP08842 583 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 LHCGRP22888 699 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CRISP1P54107 249 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 TMEM107Q6UX40 140 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 FCAMRQ8WWV6 532 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 RBP7Q96R05 134 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 TXLNGYQ9BZA5 131 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 MAGIXQ9H6Y5 334 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 TBCCD1Q9NVR7 557 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 VNN3Q9NY84 501 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 EBF1Q9UH73 591 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 SERTAD3Q9UJW9 196 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 MAFFQ9ULX9 164 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 STT3AP46977 705 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CTC1Q2NKJ3 1217 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 SCML4Q8N228 414 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms