RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MAGED1Q9Y5V3 778 aaPredicted RBP21.1■□□□□ 0.97
SMAD1-201ENST00000302085 TEAD4Q15561 434 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMAD1-201ENST00000302085 FKBP9P1Q75LS8 142 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 ZDHHC21Q8IVQ6 265 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 TFAP2CQ92754 450 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 HSH2DQ96JZ2 352 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 LYARQ9NX58 379 aaKnown RBP21.1■□□□□ 0.97
SMAD1-201ENST00000302085 CSNK1EP49674 416 aaKnown RBP21.09■□□□□ 0.97
SMAD1-201ENST00000302085 CHN2P52757 468 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 TXNL4AP83876 142 aaKnown RBP21.09■□□□□ 0.97
SMAD1-201ENST00000302085 SCARB2Q14108 478 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 ZNF750Q32MQ0 723 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 CYBRD1Q53TN4 286 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 RNF44Q7L0R7 432 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 C6orf120Q7Z4R8 191 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 ZC3H7AQ8IWR0 971 aaKnown RBP21.09■□□□□ 0.97
SMAD1-201ENST00000302085 CAMKVQ8NCB2 501 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 MAGEE2Q8TD90 523 aaPredicted RBP21.09■□□□□ 0.97
SMAD1-201ENST00000302085 TRAPPC9Q96Q05 1148 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 IL1RAPQ9NPH3 570 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 PADI4Q9UM07 663 aa21.09■□□□□ 0.97
SMAD1-201ENST00000302085 MYO1GB0I1T2 1018 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 PLOD2O00469 737 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 NOBOXO60393 691 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 ERAL1O75616 437 aaKnown RBP21.08■□□□□ 0.97
SMAD1-201ENST00000302085 RPS26P62854 115 aaKnown RBP21.08■□□□□ 0.97
SMAD1-201ENST00000302085 CDK6Q00534 326 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 SPDYE7PQ495Y7 208 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 OTUD3Q5T2D3 398 aaPredicted RBP21.08■□□□□ 0.97
SMAD1-201ENST00000302085 ARMC6Q6NXE6 501 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 SLC48A1Q6P1K1 146 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 HORMAD2Q8N7B1 307 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 ZCCHC10Q8TBK6 192 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 CNRIP1Q96F85 164 aaPredicted RBP21.08■□□□□ 0.97
SMAD1-201ENST00000302085 DLGAP2Q9P1A6 1054 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 SCOCQ9UIL1 159 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 POMT2Q9UKY4 750 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 DOLKQ9UPQ8 538 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 CEP192Q8TEP8 1941 aa21.08■□□□□ 0.97
SMAD1-201ENST00000302085 GNGT2O14610 69 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 VILLO15195 856 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 DNAJB6O75190 326 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 CCT3P49368 545 aaKnown RBP21.08■□□□□ 0.96
SMAD1-201ENST00000302085 NCBP2P52298 156 aaKnown RBP eCLIP21.08■□□□□ 0.96
SMAD1-201ENST00000302085 DUSP2Q05923 314 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 ZNF630Q2M218 657 aaPredicted RBP21.08■□□□□ 0.96
SMAD1-201ENST00000302085 CCDC80Q76M96 950 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 TMEM179BQ7Z7N9 219 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 CARM1Q86X55 608 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 DNASE2BQ8WZ79 361 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 BBS4Q96RK4 519 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 KCMF1Q9P0J7 381 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 MUTYHQ9UIF7 546 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 ABCG2Q9UNQ0 655 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 MRPS2Q9Y399 296 aaKnown RBP21.08■□□□□ 0.96
SMAD1-201ENST00000302085 EML5Q05BV3 1969 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 SCN3AQ9NY46 2000 aa21.08■□□□□ 0.96
SMAD1-201ENST00000302085 A0A1W2PS29 197 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 ARAFP10398 606 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 FASLGP48023 281 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 DSTNP60981 165 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 RUNX2Q13950 521 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 SUZ12Q15022 739 aaKnown RBP21.07■□□□□ 0.96
SMAD1-201ENST00000302085 DEFB134Q4QY38 66 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 STK32CQ86UX6 486 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 SUN3Q8TAQ9 357 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 KLHL6Q8WZ60 621 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 RERGQ96A58 199 aaPredicted RBP21.07■□□□□ 0.96
SMAD1-201ENST00000302085 TPD52L3Q96J77 140 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 ROGDIQ9GZN7 287 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 SEMA6CQ9H3T2 930 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 ADPRHL2Q9NX46 363 aa21.07■□□□□ 0.96
SMAD1-201ENST00000302085 G3V2T6 193 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 AQP9O43315 295 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 SUV39H1O43463 412 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 EIF2S1P05198 315 aaKnown RBP21.06■□□□□ 0.96
SMAD1-201ENST00000302085 ST6GAL1P15907 406 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 NTSP30990 170 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 KCNJ10P78508 379 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 MERTKQ12866 999 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 PPP1R8Q12972 351 aaKnown RBP21.06■□□□□ 0.96
SMAD1-201ENST00000302085 CEACAM20Q6UY09 585 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 C17orf82Q86X59 251 aaPredicted RBP21.06■□□□□ 0.96
SMAD1-201ENST00000302085 ZDHHC13Q8IUH4 622 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 CCDC116Q8IYX3 515 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 SERINC2Q96SA4 455 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 SMPD3Q9NY59 655 aaPredicted RBP21.06■□□□□ 0.96
SMAD1-201ENST00000302085 VNN3Q9NY84 501 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 URADA6NGE7 173 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 A6NHS1 94 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 hCG_2039718K7EN88 272 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 HCRTR1O43613 425 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 UBXN7O94888 489 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 C8orf89P0DMQ9 161 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 PTGER1P34995 402 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 ARSFP54793 590 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 SELENOWP63302 87 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 VLDLRP98155 873 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 COL9A2Q14055 689 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms