RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SCG5P05408 212 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 ANKRD34CP0C6C1 535 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 ABHD18Q0P651 414 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 AKIRIN2Q53H80 203 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 CRB2Q5IJ48 1285 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 KIAA1841Q6NSI8 718 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 METTL7BQ6UX53 244 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 USP45Q70EL2 814 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 IZUMO1Q8IYV9 350 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 NAGSQ8N159 534 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 CFAP52Q8N1V2 620 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 FAM46DQ8NEK8 389 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 SENP5Q96HI0 755 aaPredicted RBP13.78□□□□□ -0.2
CDT1-201ENST00000301019 PITX2Q99697 317 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 FZD4Q9ULV1 537 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 PCDHGB3Q9Y5G1 929 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 COL11A1P12107 1806 aaPredicted RBP13.77□□□□□ -0.2
CDT1-201ENST00000301019 STX16O14662 325 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 MMP20O60882 483 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 ACVRL1P37023 503 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 MAGEA2P43356 314 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 SELENOPP49908 381 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.2
CDT1-201ENST00000301019 TEAD4Q15561 434 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 NTRK2Q16620 822 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 ARMC12Q5T9G4 340 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 ATG9BQ674R7 924 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 SFRP4Q6FHJ7 346 aaPredicted RBP13.77□□□□□ -0.2
CDT1-201ENST00000301019 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 PAQR7Q86WK9 346 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 CRELD1Q96HD1 420 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 KCTD7Q96MP8 289 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 GAS2L1Q99501 681 aaPredicted RBP13.77□□□□□ -0.2
CDT1-201ENST00000301019 DERL2Q9GZP9 239 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 ELOVL2Q9NXB9 296 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 SLCO1C1Q9NYB5 712 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 CDH10Q9Y6N8 788 aa13.77□□□□□ -0.2
CDT1-201ENST00000301019 A0A1W2PPK0 400 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 ZNF806P0C7X5 589 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 COX7A2P14406 83 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 GZMMP51124 257 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 FKBP1BP68106 108 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 TSTA3Q13630 321 aaPredicted RBP13.77□□□□□ -0.21
CDT1-201ENST00000301019 MARCH8Q5T0T0 291 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 PTOV1Q86YD1 416 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 SCRN2Q96FV2 425 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 SLC2A13Q96QE2 648 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 PIGUQ9H490 435 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 CLMPQ9H6B4 373 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 RPS6KA6Q9UK32 745 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 RAB23Q9ULC3 237 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 INPPL1O15357 1258 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 YY2O15391 372 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 NDUFA2O43678 99 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 PTP4A3O75365 173 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 ZNF254O75437 659 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 TBX18O95935 607 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 CRYBA2P53672 197 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 HSF2Q03933 536 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 GLT6D1Q7Z4J2 308 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 ADGRG3Q86Y34 549 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 GPR156Q8NFN8 814 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 BTN2A2Q8WVV5 523 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 FBXO17Q96EF6 278 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 SORCS2Q96PQ0 1159 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 ZNF382Q96SR6 550 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 MTERF1Q99551 399 aaKnown RBP13.77□□□□□ -0.21
CDT1-201ENST00000301019 TSSK6Q9BXA6 273 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 OR51J1Q9H342 316 aa13.77□□□□□ -0.21
CDT1-201ENST00000301019 PIN4Q9Y237 131 aaKnown RBP13.77□□□□□ -0.21
CDT1-201ENST00000301019 SHISA3A0PJX4 238 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 SOWAHBA6NEL2 793 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 FFAR2O15552 330 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 RPP40O75818 363 aaKnown RBP13.76□□□□□ -0.21
CDT1-201ENST00000301019 PDYNP01213 254 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MT-ND4P03905 459 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ETFAP13804 333 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ETV5P41161 510 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ITGA1P56199 1179 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 KCNC3Q14003 757 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ZNF169Q14929 603 aaPredicted RBP13.76□□□□□ -0.21
CDT1-201ENST00000301019 ZNF852Q6ZMS4 543 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 OR4K1Q8NGD4 311 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MRPS31Q92665 395 aaKnown RBP13.76□□□□□ -0.21
CDT1-201ENST00000301019 ATOH1Q92858 354 aaPredicted RBP13.76□□□□□ -0.21
CDT1-201ENST00000301019 NXPE2Q96DL1 559 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 PIP5K1AQ99755 562 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MARVELD1Q9BSK0 173 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ACPTQ9BZG2 426 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ENAMQ9NRM1 1142 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 GPR160Q9UJ42 338 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 SESN1Q9Y6P5 492 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 LOC285556D6RIA3 1793 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 SMIM28A0A1B0GU29 152 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms