RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 GABARAPL3Q9BY60 117 aa14.89□□□□□ -0.03
UBAP1-201ENST00000297661 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ARHGEF33A8MVX0 844 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 H3BM21 787 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 SAP18O00422 153 aaKnown RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 PDPK1O15530 556 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 C1QBP02746 253 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 FHP07954 510 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 POU3F3P20264 500 aaPredicted RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 PRPS1L1P21108 318 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 HLA-DMAP28067 261 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 MAPK1P28482 360 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 KIR2DL3P43628 341 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 SLC9A3P48764 834 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 GAB1Q13480 694 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 RAB33AQ14088 237 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 MPPE1Q53F39 396 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 C19orf48Q6RUI8 117 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 RNF165Q6ZSG1 346 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ZNF605Q86T29 641 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 C1orf52Q8N6N3 182 aaKnown RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 VANGL1Q8TAA9 524 aaPredicted RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ACAT2Q9BWD1 397 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 NIPAL2Q9H841 368 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 TPT1P8Q9HAU6 139 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 TMEM184CQ9NVA4 438 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 VPS29Q9UBQ0 182 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 FZD4Q9ULV1 537 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 M0R129 80 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 LEFTY2O00292 366 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 OLFM2O95897 454 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 C9P02748 559 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 JUPP14923 745 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ACSM2AQ08AH3 577 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 QPRTQ15274 297 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 TOR1AIP1Q5JTV8 583 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 SLC35F1Q5T1Q4 408 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ACSM2BQ68CK6 577 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 LAMTOR1Q6IAA8 161 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 FAM180BQ6P0A1 224 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ZNF852Q6ZMS4 543 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ZNF367Q7RTV3 350 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 THOC6Q86W42 341 aaKnown RBP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.88□□□□□ -0.03
UBAP1-201ENST00000297661 TOR1AIP2Q8NFQ8 470 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 OR4K1Q8NGD4 311 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 ECHDC3Q96DC8 303 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 OR4K3Q96R72 315 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 LYSMD1Q96S90 227 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.88□□□□□ -0.033e-8■■■■□ 19.6
UBAP1-201ENST00000297661 GLTPQ9NZD2 209 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 SH3BP4Q9P0V3 963 aa14.88□□□□□ -0.03
UBAP1-201ENST00000297661 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 GABRR3A8MPY1 467 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 LATS1O95835 1130 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 ZNF30P17039 623 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 OR1E2P47887 323 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 TGM4P49221 684 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 HTRA4P83105 476 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-201ENST00000297661 GGTA1PQ4G0N0 100 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 TIGD3Q6B0B8 471 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 FAM131AQ6UXB0 335 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 KRT73Q86Y46 540 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 OR4M2Q8NGB6 313 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CYB5D2Q8WUJ1 264 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 TRMT61AQ96FX7 289 aaKnown RBP14.87□□□□□ -0.03
UBAP1-201ENST00000297661 C1QTNF7Q9BXJ2 289 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SGK2Q9HBY8 427 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 HCFC1R1Q9NWW0 138 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 B3GNT2Q9NY97 397 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SLC23A1Q9UHI7 598 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 IGLV3-16A0A075B6K0 115 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SMLR1H3BR10 107 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 GFYI3L273 518 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 TSPAN6O43657 245 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SGTAO43765 313 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 OR7A10O76100 309 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SEMG1P04279 462 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CSF3P09919 207 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 BMP8BP34820 402 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CTNNB1P35222 781 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CSNK1DP48730 415 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CTSCP53634 463 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 PSPHP78330 225 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 MTAPQ13126 283 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SSX1Q16384 188 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 IER5LQ5T953 404 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CCDC149Q6ZUS6 474 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 FAM217AQ8IXS0 508 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 NAGSQ8N159 534 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CAMKK1Q8N5S9 505 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 ENKURQ8TC29 256 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 CSGALNACT1Q8TDX6 532 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 MARVELD3Q96A59 401 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 ZNF558Q96NG5 402 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 C17orf62Q9BQA9 187 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 DUSP26Q9BV47 211 aa14.87□□□□□ -0.03
UBAP1-201ENST00000297661 RIOK2Q9BVS4 552 aaKnown RBP14.87□□□□□ -0.03
UBAP1-201ENST00000297661 SLC46A2Q9BY10 475 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms