RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ETV7Q9Y603 341 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 A0A087WWV3 80 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ARGFXA6NJG6 315 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GAPDHSO14556 408 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HTRA2O43464 458 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PGAM2P15259 253 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 S1PR1P21453 382 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PBX3P40426 434 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MCAMP43121 646 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RAB13P51153 203 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HMGCS1Q01581 520 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FAM174BQ3ZCQ3 159 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 C6orf141Q5SZD1 244 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DCLRE1AQ6PJP8 1040 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GPR151Q8TDV0 419 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RXFP2Q8WXD0 754 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SLAMF9Q96A28 289 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 AZIN2Q96A70 460 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DUS3LQ96G46 650 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 C17orf62Q9BQA9 187 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LMAN1LQ9HAT1 526 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ACOXLQ9NUZ1 547 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 METTL15A6NJ78 407 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RAD51DO75771 328 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 POMCP01189 267 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HLA-DMAP28067 261 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ADORA2BP29275 332 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 L1CAMP32004 1257 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MLLT10P55197 1068 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF484Q5JVG2 852 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CD276Q5ZPR3 534 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PARGQ86W56 976 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RAVER1Q8IY67 606 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF619Q8N2I2 560 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SLC44A5Q8NCS7 719 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TWIST2Q8WVJ9 160 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 NT5C3BQ969T7 300 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 COL26A1Q96A83 441 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RRAGCQ9HB90 399 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OXSMQ9NWU1 459 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SLC6A5Q9Y345 797 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HEBP2Q9Y5Z4 205 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 VSTM5A8MXK1 200 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF670-ZNF695F2Z2N8 137 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 EIF3FO00303 357 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LYRM1O43325 122 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ADH1AP07327 375 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZBTB48P10074 688 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HOXC12P31275 282 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SLC16A2P36021 539 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LEPRP48357 1165 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MADCAM1Q13477 382 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SPPL2CQ8IUH8 684 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LSMEM2Q8N112 164 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SYT14Q8NB59 555 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TRAPPC12Q8WVT3 735 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FBXO32Q969P5 355 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TCF25Q9BQ70 676 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MFFQ9GZY8 342 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SMDT1Q9H4I9 107 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DCP1AQ9NPI6 582 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CAPN5O15484 640 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SUMO1P63165 101 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 COX19Q49B96 90 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ADGRF1Q5T601 910 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SUMF1Q8NBK3 374 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TUT1Q9H6E5 874 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 VSX1Q9NZR4 365 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 NARFQ9UHQ1 456 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FBXO5Q9UKT4 447 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MAST2Q6P0Q8 1798 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FAM170BA6NMN3 283 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PIP5K1BO14986 540 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 YY2O15391 372 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CREB1P16220 341 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TSPAN8P19075 237 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RPL38P63173 70 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF543Q08ER8 600 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ACOT6Q3I5F7 207 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GPR139Q6DWJ6 353 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 EFCAB12Q6NXP0 572 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TTLL10Q6ZVT0 673 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PTGR2Q8N8N7 351 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RNF149Q8NC42 400 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR2T33Q8NG76 320 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ADAMTS16Q8TE57 1224 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR8D1Q8WZ84 308 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MFSD14AQ96MC6 490 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SAP130Q9H0E3 1048 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FBXO8Q9NRD0 319 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 THG1LQ9NWX6 298 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 IKZF2Q9UKS7 526 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CNTNAP5Q8WYK1 1306 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TEX13DA0A0J9YY54 714 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 USP17L3A6NCW0 530 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 USP17L4A6NCW7 530 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MAFKO60675 156 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TUBG1P23258 451 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms