RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 A0A1B0GTW7 788 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 A0A1W2PR48 441 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 URADA6NGE7 173 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 H0YGG7 62 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 NDUFB5O43674 189 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 PRAMEF10O60809 474 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 ZNF888P0CJ79 500 aaPredicted RBP14.73□□□□□ -0.05
LSM6-201ENST00000296581 ARF3P61204 181 aaPredicted RBP14.73□□□□□ -0.05
LSM6-201ENST00000296581 ADRM1Q16186 407 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 LRRC36Q1X8D7 754 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 VMACQ2NL98 169 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 C14orf28Q4W4Y0 310 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 PMS2CLQ68D20 193 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 ZCCHC8Q6NZY4 707 aaKnown RBP14.73□□□□□ -0.05
LSM6-201ENST00000296581 C11orf74Q86VG3 221 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 PDSS2Q86YH6 399 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 PNPT1Q8TCS8 783 aaKnown RBP14.73□□□□□ -0.05
LSM6-201ENST00000296581 UCN3Q969E3 161 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 POP5Q969H6 163 aaKnown RBP14.73□□□□□ -0.05
LSM6-201ENST00000296581 ACSS1Q9NUB1 689 aaPredicted RBP14.73□□□□□ -0.05
LSM6-201ENST00000296581 OLAHQ9NV23 265 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 C5AR2Q9P296 337 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 ATG4BQ9Y4P1 393 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CSNK1G3Q9Y6M4 447 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 TECTAO75443 2155 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 COL6A3P12111 3177 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 PROS1P07225 676 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 FCGR1AP12314 374 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 BTN3A2P78410 334 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 MLC1Q15049 377 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 SFT2D3Q587I9 215 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 MANEAQ5SRI9 462 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 OR52N2Q8NGI0 321 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 FAM162AQ96A26 154 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 RERGQ96A58 199 aaPredicted RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 EXOSC8Q96B26 276 aaKnown RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 SLC38A3Q99624 504 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 EPS8L2Q9H6S3 715 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 AGPAT4Q9NRZ5 378 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 DCAF13Q9NV06 445 aaKnown RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 GPATCH2Q9NW75 528 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 DTNAQ9Y4J8 743 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 LAMTOR5O43504 91 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 SH3BP5O60239 455 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 AIFM1O95831 613 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 BMP2P12643 396 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 ST6GAL1P15907 406 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 IL1RNP18510 177 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 UQCRC2P22695 453 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 SNRPNP63162 240 aaKnown RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 VEZF1Q14119 521 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 SUZ12Q15022 739 aaKnown RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 GRAMD1BQ3KR37 738 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 RBM44Q6ZP01 1051 aaKnown RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 DGLUCYQ7Z3D6 616 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 MAML2Q8IZL2 1156 aaPredicted RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 ANKFN1Q8N957 763 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 PSMA8Q8TAA3 256 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 NETO1Q8TDF5 533 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 ZBED6CLQ96FA7 236 aaPredicted RBP14.72□□□□□ -0.05
LSM6-201ENST00000296581 CXorf36Q9H7Y0 433 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 NEUROD4Q9HD90 331 aa14.72□□□□□ -0.05
LSM6-201ENST00000296581 PROM1O43490 865 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 NTRK1P04629 796 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 GSTT2P0CG29 244 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 GSTT2BP0CG30 244 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 FASP25445 335 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 DHPSP49366 369 aaPredicted RBP14.71□□□□□ -0.05
LSM6-201ENST00000296581 MANFP55145 182 aaKnown RBP14.71□□□□□ -0.05
LSM6-201ENST00000296581 BNC1Q01954 994 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.71□□□□□ -0.05
LSM6-201ENST00000296581 FAM180BQ6P0A1 224 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 Q6ZNX1 250 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 AMIGO2Q86SJ2 522 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 C19orf47Q8N9M1 422 aaKnown RBP14.71□□□□□ -0.05
LSM6-201ENST00000296581 NCLNQ969V3 563 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 PPWD1Q96BP3 646 aaKnown RBP14.71□□□□□ -0.05
LSM6-201ENST00000296581 NECAB3Q96P71 396 aaPredicted RBP14.71□□□□□ -0.05
LSM6-201ENST00000296581 SERINC2Q96SA4 455 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 SEPHS2Q99611 448 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 UGT2B28Q9BY64 529 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 SEMA6AQ9H2E6 1030 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 RAD21L1Q9H4I0 556 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 SLC35C2Q9NQQ7 365 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 UTS2RQ9UKP6 389 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 FBXW2Q9UKT8 454 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 CES1P1Q9UKY3 287 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 SNX11Q9Y5W9 270 aa14.71□□□□□ -0.05
LSM6-201ENST00000296581 TNFRSF21O75509 655 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 KRT75O95678 551 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 RAP2AP10114 183 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 CDH3P22223 829 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 RXRGP48443 463 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 EPHA4P54764 986 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 VAC14Q08AM6 782 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 FADDQ13158 208 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 SRSF5Q13243 272 aaKnown RBP14.71□□□□□ -0.06
LSM6-201ENST00000296581 FAM98BQ52LJ0 330 aaKnown RBP14.71□□□□□ -0.06
LSM6-201ENST00000296581 C6orf132Q5T0Z8 1188 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms