RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 COL6A6A6NMZ7 2263 aa11.38□□□□□ -0.59
HMGB2-201ENST00000296503 IGHV1-45A0A0A0MS14 117 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 IGHV3-20A0A0C4DH32 117 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 RTCAO00442 366 aaKnown RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 OTCP00480 354 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 PDGFAP04085 211 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 CYC1P08574 325 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 RPS17P08708 135 aaKnown RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 PABPC4LP0CB38 370 aaKnown RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 COX6A1P12074 109 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 IMPDH1P20839 514 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 CRHR1P34998 444 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 NEK2P51955 445 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 EFNA3P52797 238 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 RPS13P62277 151 aaKnown RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 HERVK_113P63132 956 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 CLCQ05315 142 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 SF3A3Q12874 501 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 ABRAXAS2Q15018 415 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 CCDC153Q494R4 210 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 UNC50Q53HI1 259 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 ZNF678Q5SXM1 525 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 KHDRBS2Q5VWX1 349 aaKnown RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 LANCL3Q6ZV70 420 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 CPEB2Q7Z5Q1 589 aaKnown RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 KBTBD2Q8IY47 623 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 OR4F6Q8NGB9 312 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 NRG4Q8WWG1 115 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 ZNF75CPQ92670 426 aaPredicted RBP11.37□□□□□ -0.59
HMGB2-201ENST00000296503 RGMAQ96B86 450 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 QRFPRQ96P65 431 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 ERVK-6Q9BXR3 956 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 LHPPQ9H008 270 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 MLXIPLQ9NP71 852 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 PRDM7Q9NQW5 492 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 RIC8BQ9NVN3 520 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 PCDHGB7Q9Y5F8 929 aa11.37□□□□□ -0.59
HMGB2-201ENST00000296503 LOC102723996A0A087X1L8 192 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SMIM31A0A1B0GVY4 71 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 MAGEB17A8MXT2 336 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 PPP6CO00743 305 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 COQ9O75208 318 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ALPPP05187 535 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 LYNP07948 512 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 MYL2P10916 166 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ICAM2P13598 275 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 CERS1P27544 350 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 PRKAA2P54646 552 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 BTG2P78543 158 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 RHAGQ02094 409 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 Q0VFX4 171 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 KLRB1Q12918 225 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 RCN1Q15293 331 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SGO1Q5FBB7 561 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 OR4C11Q6IEV9 310 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 AAGABQ6PD74 315 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 PRICKLE2Q7Z3G6 844 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 NET1Q7Z628 596 aaPredicted RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 UBE3DQ7Z6J8 389 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ANKRD37Q7Z713 158 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 STMN2Q93045 179 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 CCDC126Q96EE4 140 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SMAD5Q99717 465 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 C1QTNF3Q9BXJ4 246 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ZNF700Q9H0M5 742 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ZNF552Q9H707 407 aaPredicted RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 DMRT3Q9NQL9 472 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 EMCNQ9ULC0 261 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 TSC22D4Q9Y3Q8 395 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 TLN1Q9Y490 2541 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 TNRC6AQ8NDV7 1962 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 CLDN4O14493 209 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SEC24DO94855 1032 aaPredicted RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 CBX6O95503 412 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ATP5A1P25705 553 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SSR2P43308 183 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 LIM2P55344 173 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 RAB38P57729 211 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 OR4D2P58180 307 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SLC18A2Q05940 514 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 TRAF3Q13114 568 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 PCOLCEQ15113 449 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 TRMT5Q32P41 509 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 LIN52Q52LA3 116 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 SFT2D3Q587I9 215 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 COLEC12Q5KU26 742 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 VWA5B1Q5TIE3 1220 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 AGAP7PQ5VUJ5 663 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 FRG2Q64ET8 278 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 FAM47EQ6ZV65 393 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 CCNYL1Q8N7R7 359 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ACOT4Q8N9L9 421 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 WDR20Q8TBZ3 569 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 TSLPQ969D9 159 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 MAGEB10Q96LZ2 347 aaPredicted RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 AGAP4Q96P64 663 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 FRG2BQ96QU4 278 aa11.36□□□□□ -0.59
HMGB2-201ENST00000296503 IQCGQ9H095 443 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 C12orf65Q9H3J6 166 aaKnown RBP11.36□□□□□ -0.59
HMGB2-201ENST00000296503 ELOVL6Q9H5J4 265 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms