RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MS4A15Q8N5U1 240 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 ZFP90Q8TF47 636 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 CASTOR1Q8WTX7 329 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 MYNNQ9NPC7 610 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 IGSF5Q9NSI5 407 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 EDARQ9UNE0 448 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 KAT6AQ92794 2004 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 UPK3BL1B0FP48 263 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 UPK3BL2E5RIL1 263 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 VILLO15195 856 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 TLL1O43897 1013 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 MAFKO60675 156 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 MMP20O60882 483 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 SOCS5O75159 536 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 RPL17P18621 184 aaKnown RBP10.6□□□□□ -0.71
PBRM1-201ENST00000296302 CHMP24386 653 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 FLT3LGP49771 235 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 CXCR4P61073 352 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 POU4F2Q12837 409 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 MAPK14Q16539 360 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 ARSIQ5FYB1 569 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 MARCH4Q9P2E8 410 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-201ENST00000296302 PCTPQ9UKL6 214 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 PCDHB14Q9Y5E9 798 aa10.6□□□□□ -0.71
PBRM1-201ENST00000296302 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 TEX13DA0A0J9YY54 714 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 A0A1W2PQL4 384 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 GMPRP36959 345 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SNRPD2P62316 118 aaKnown RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 CLDN10P78369 228 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 CYP27C1Q4G0S4 372 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 AGAP6Q5VW22 663 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 DUS1LQ6P1R4 473 aaKnown RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 DCUN1D3Q8IWE4 304 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SLC7A5P1Q8MH63 180 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 GATAD2BQ8WXI9 593 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SLC25A36Q96CQ1 311 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 AGAP4Q96P64 663 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 STRA6Q9BX79 667 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 WDR26Q9H7D7 661 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 Q9N2J8 555 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SLC22A31A6NKX4 558 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 NARSO43776 548 aaKnown RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 ATE1O95260 518 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SCGB1D2O95969 90 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 PAHP00439 452 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 MAGEA11P43364 429 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 PCBP2Q15366 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 COL28A1Q2UY09 1125 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 PLPP4Q5VZY2 271 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 TOR1AIP2Q8NFQ8 470 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 OR6Q1Q8NGQ2 317 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 CD300LFQ8TDQ1 290 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 HIST1H2AAQ96QV6 131 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 LAMP5Q9UJQ1 280 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 FBXL21Q9UKT6 434 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 LIPT1Q9Y234 373 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 BORCS7-ASMTA0A0B4J1R7 106 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 TMEM150CB9EJG8 249 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 MLLT1Q03111 559 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 GK3PQ14409 553 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 CDKL4Q5MAI5 379 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 FTMTQ8N4E7 242 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 ZNF778Q96MU6 729 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 ZNF304Q9HCX3 659 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 MYH7BA7E2Y1 1941 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 XRN1Q8IZH2 1706 aaKnown RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 PCDHGA12O60330 932 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 VNN2O95498 520 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 PRKACBP22694 351 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 MASP1P48740 699 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 LRP8Q14114 963 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 UBE2UQ5VVX9 321 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SIAH1Q8IUQ4 282 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 SLC5A8Q8N695 610 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 FBXO15Q8NCQ5 510 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 OR52B6Q8NGF0 335 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 NSMAFQ92636 917 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 DPH2Q9BQC3 489 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 TBL1XR1Q9BZK7 514 aa10.59□□□□□ -0.71
PBRM1-201ENST00000296302 NUFIP1Q9UHK0 495 aaKnown RBP10.59□□□□□ -0.71
PBRM1-201ENST00000296302 TEX13CA0A0J9YWL9 993 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 A0A0U1RQF3 1178 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 SRCP12931 536 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ACP5P13686 325 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 HSD11B1P28845 292 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 WASP42768 502 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 MLLT10P55197 1068 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ALG1LQ6GMV1 187 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 VITQ6UXI7 678 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF783Q6ZMS7 281 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CHPT1Q8WUD6 406 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PRRG4Q9BZD6 226 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PADI2Q9Y2J8 665 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 COL1A1P02452 1464 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms