RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CA5AP35218 305 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 BDKRB1P46663 353 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 PRR5P85299 388 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 RING1Q06587 406 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 LARS2Q15031 903 aaKnown RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 DPY19L1Q2PZI1 675 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 METTL27Q8N6F8 245 aaPredicted RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 COX18Q8N8Q8 333 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 TMEM248Q9NWD8 314 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 ZNF282Q9UDV7 671 aaPredicted RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 FTSJ1Q9UET6 329 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 EBLN1P0CF75 366 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CELP19835 753 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CST6Q15828 149 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 RNF130Q86XS8 419 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 GOLM1Q8NBJ4 401 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 C9orf43Q8TAL5 461 aaPredicted RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 TAPBPLQ9BX59 468 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 KCNH6Q9H252 994 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 C12orf4Q9NQ89 552 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 NLKQ9UBE8 527 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 MPZL2O60487 215 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 UPK1BO75841 260 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 HOXC12P31275 282 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CD300CQ08708 224 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 GALNT1Q10472 559 aaPredicted RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 PM20D1Q6GTS8 502 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CEACAM20Q6UY09 585 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 UMODL1-AS1Q8N2C9 162 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 OR5M3Q8NGP4 307 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 HEBP1Q9NRV9 189 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 ZCCHC3Q9NUD5 404 aaKnown RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 OR2B3O76000 313 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 SEMA4FO95754 770 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 SOX9P48436 509 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 RPS26P62854 115 aaKnown RBP12.89□□□□□ -0.35
HPS3-201ENST00000296051 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 ARL9Q6T311 187 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CAMKVQ8NCB2 501 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 RPLP0P6Q8NHW5 317 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CRELD1Q96HD1 420 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 OR2M4Q96R27 311 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 CD300AQ9UGN4 299 aa12.89□□□□□ -0.35
HPS3-201ENST00000296051 TNFRSF10BO14763 440 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 GNB5O14775 395 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 LHFPL3Q86UP9 236 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 IQCHQ86VS3 1027 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 APCDD1Q8J025 514 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 OR9Q2Q8NGE9 314 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 TSACCQ96A04 125 aaPredicted RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 CEBPBP17676 345 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 NPAS3Q8IXF0 933 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 RNF175Q8N4F7 328 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 RHBDD1Q8TEB9 315 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 CPNE5Q9HCH3 593 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 PLCH1Q4KWH8 1693 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 H3BSH0 61 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 PDPK1O15530 556 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 ETFAP13804 333 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 CD70P32970 193 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 TGFBR1P36897 503 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 RPS13P62277 151 aaKnown RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 IER5LQ5T953 404 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 KCTD11Q693B1 232 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 TICAM1Q8IUC6 712 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 FAM83FQ8NEG4 500 aaPredicted RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 OR6Q1Q8NGQ2 317 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 PLAC1Q9HBJ0 212 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 GPR34Q9UPC5 381 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 FAM221BA6H8Z2 402 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 KDM4BO94953 1096 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 EPOP01588 193 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 AHCYP23526 432 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 BTN3A2P78410 334 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 KRT77Q7Z794 578 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 TSPYL5Q86VY4 417 aaPredicted RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 FAM98AQ8NCA5 519 aaKnown RBP12.88□□□□□ -0.35
HPS3-201ENST00000296051 MSANTD3Q96H12 275 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms