RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CPNE7Q9UBL6 633 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 PILRAQ9UKJ1 303 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 ENTPD2Q9Y5L3 495 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 A0A1B0GTW7 788 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 CCDC160A6NGH7 325 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 TMPRSS11DO60235 418 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SH3BP5O60239 455 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 NDUFS2O75306 463 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 CD38P28907 300 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 CDK6Q00534 326 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 PRRT3Q5FWE3 981 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 TMEM179BQ7Z7N9 219 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 ZC3H7AQ8IWR0 971 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 METTL25Q8N6Q8 603 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 EXOSC8Q96B26 276 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 LRRC61Q9BV99 259 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 RUBCNLQ9H714 662 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 CXorf36Q9H7Y0 433 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 FAM118AQ9NWS6 357 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 TAS2R7Q9NYW3 318 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 THEGQ9P2T0 379 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 ANGPT4Q9Y264 503 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SAMHD1Q9Y3Z3 626 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 PRUNE2Q8WUY3 3088 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 ARHGEF17Q96PE2 2063 aaPredicted RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 A0A0G2JN53 185 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ERI3O43414 337 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 FPR1P21462 350 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 PRKACGP22612 351 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ITGA1P56199 1179 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 TGM3Q08188 693 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 CNPY1Q3B7I2 92 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SPDYE7PQ495Y7 208 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 MRM1Q6IN84 353 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 FAM180BQ6P0A1 224 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 THAP5Q7Z6K1 395 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SDR16C5Q8N3Y7 309 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 NFKBIDQ8NI38 313 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SPPL2AQ8TCT8 520 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 JPH3Q8WXH2 748 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 MS4A6EQ96DS6 147 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 NRBF2Q96F24 287 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 TEFMQ96QE5 360 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 DUSP15Q9H1R2 295 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 ACSS1Q9NUB1 689 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 TEX10Q9NXF1 929 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 EHD3Q9NZN3 535 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 PADI2Q9Y2J8 665 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ZW10O43264 779 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 DPM1O60762 260 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 BMP10O95393 424 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 TDGF1P13385 188 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 UGT2B7P16662 529 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 PCBP4P57723 403 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 DSTNP60981 165 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 STXBP1P61764 594 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 RPS15AP62244 130 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 KCNJ10P78508 379 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 HSPB3Q12988 150 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ZC3H12BQ5HYM0 836 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 NDUFAF5Q5TEU4 345 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 FCRL6Q6DN72 434 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 RBM44Q6ZP01 1051 aaKnown RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 TRIM48Q8IWZ4 208 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 OR2L5Q8NG80 312 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 NEURL3Q96EH8 262 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 GABARAPL1Q9H0R8 117 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ABCG4Q9H172 646 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 PRDM7Q9NQW5 492 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 NUP214P35658 2090 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 TRBV23OR9-2A0A075B6M9 112 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 CCDC163A0A0D9SF12 145 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 C4orf51C9J302 202 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 M0QX08 132 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 TLR4O00206 839 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 VILLO15195 856 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 OR6B1O95007 311 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 DIRAS1O95057 198 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SMIM10L1P0DMW3 83 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ARAFP10398 606 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 CDH2P19022 906 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 HIST1H1TP22492 207 aaPredicted RBP8.67□□□□□ -1.02
PDPN-201ENST00000294489 IGFBP5P24593 272 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ESRRGP62508 458 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 KCNAB2Q13303 367 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 MLC1Q15049 377 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 IFI44LQ53G44 452 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 FBXO42Q6P3S6 717 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 CEACAM20Q6UY09 585 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 CCDC80Q76M96 950 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SLC37A2Q8TED4 501 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SMIM10Q96HG1 83 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 C7orf34Q96L11 122 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 KLHL31Q9H511 634 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 EPS8L2Q9H6S3 715 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SLAMF7Q9NQ25 335 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms