RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 YIPF2Q9BWQ6 316 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 EPN3Q9H201 632 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 TRIM45Q9H8W5 580 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 TRPS1Q9UHF7 1281 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CES1P1Q9UKY3 287 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 ATG4BQ9Y4P1 393 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 ASH1LQ9NR48 2969 aaKnown RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 NSG1A0A0A6YYJ2 146 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 CLEC18AA5D8T8 446 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SAP18O00422 153 aaKnown RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 B3GALT2O43825 422 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 MAN1A2O60476 641 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SEC24DO94855 1032 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 OR4F21O95013 312 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ESRRBO95718 433 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 OTCP00480 354 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 PDYNP01213 254 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 DHRS4L1P0CG22 281 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ICAM2P13598 275 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 CHN1P15882 459 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 JAK1P23458 1154 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 PPP2R1BP30154 601 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 CCNG1P51959 295 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 NAGLUP54802 743 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SLC26A5P58743 744 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SKP1P63208 163 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 RAE1P78406 368 aaKnown RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF33BQ06732 778 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SLAMF1Q13291 335 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 MFAP5Q13361 173 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 RAPSNQ13702 412 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 PCLAFQ15004 111 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 KIAA0040Q15053 153 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 TERF2Q15554 542 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 MINDY4Q4G0A6 757 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SFT2D3Q587I9 215 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 TCHHL1Q5QJ38 904 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 B3GNTL1Q67FW5 361 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 C18orf63Q68DL7 685 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 GALNT18Q6P9A2 607 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 CLEC18BQ6UXF7 455 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ISLR2Q6UXK2 745 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 DGAT2L6Q6ZPD8 337 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 RNF165Q6ZSG1 346 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 FRMD7Q6ZUT3 714 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF605Q86T29 641 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 CUZD1Q86UP6 607 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 EXOC3L1Q86VI1 746 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SLC22A9Q8IVM8 553 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF595Q8IYB9 648 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 C4orf33Q8N1A6 199 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 CLEC18CQ8NCF0 446 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 RDH11Q8TC12 318 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 BRIX1Q8TDN6 353 aaKnown RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 AGAP11Q8TF27 550 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 PNPLA2Q96AD5 504 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 THOC3Q96J01 351 aaKnown RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 PTCHD1Q96NR3 888 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 GATA5Q9BWX5 397 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-201ENST00000288344 RNF32Q9H0A6 362 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 BRF2Q9HAW0 419 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 RIC8BQ9NVN3 520 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 SLC17A7Q9P2U7 560 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 ADAM29Q9UKF5 820 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 PLAAQ9Y263 795 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 LRRK2Q5S007 2527 aa8.56□□□□□ -1.04
HMGN1-201ENST00000288344 TLDC2A0PJX2 215 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 MANBAO00462 879 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 SH3BGRLO75368 114 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 SUPT7LO94864 414 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 MLYCDO95822 493 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 DDAH2O95865 285 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 IGKV3-11P04433 115 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 FGF4P08620 206 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 PCNAP12004 261 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 CPA3P15088 417 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 KRT15P19012 456 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 HPDP32754 393 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-201ENST00000288344 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
HMGN1-201ENST00000288344 HTR6P50406 440 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 PKNOX1P55347 436 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 SRSF1Q07955 248 aaKnown RBP eCLIP8.55□□□□□ -1.04
HMGN1-201ENST00000288344 LCP2Q13094 533 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 AP5B1Q2VPB7 878 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 COLEC12Q5KU26 742 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 AGAP7PQ5VUJ5 663 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 PAPD4Q6PIY7 484 aaKnown RBP8.55□□□□□ -1.04
HMGN1-201ENST00000288344 C10orf107Q8IVU9 208 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 TEX19Q8NA77 164 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 CATSPER1Q8NEC5 780 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 DNAJB14Q8TBM8 379 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 ADAMTS18Q8TE60 1221 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 PPP4R1Q8TF05 950 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 METTL21AQ8WXB1 218 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 MIB2Q96AX9 1013 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 TM4SF18Q96CE8 201 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 REPS1Q96D71 796 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 MTFMTQ96DP5 389 aaKnown RBP8.55□□□□□ -1.04
HMGN1-201ENST00000288344 CCDC126Q96EE4 140 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms