RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 LCKP06239 509 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 ANXA3P12429 323 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 TMEM115Q12893 351 aaPredicted RBP12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 LRRC37A5PQ49AS3 106 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 LIPKQ5VXJ0 399 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 ATG9BQ674R7 924 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 SLC25A25Q6KCM7 469 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 CEACAM20Q6UY09 585 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 FKBP14Q9NWM8 211 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 MARK1Q9P0L2 795 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 PCDHA9Q9Y5H5 950 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 FOCADQ5VW36 1801 aa12.05□□□□□ -0.48
SLC6A1-201ENST00000287766 C1QTNF3-AMACRE9PGA6 284 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 STSP08842 583 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 CELP19835 753 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 FPGSQ05932 587 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 GRK1Q15835 563 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 FAM76BQ5HYJ3 339 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 MANEALQ5VSG8 457 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 FAM129CQ86XR2 697 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 KIF18BQ86Y91 864 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 ZNF471Q9BX82 626 aaPredicted RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 ACPTQ9BZG2 426 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 ANKHQ9HCJ1 492 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 OR10H1Q9Y4A9 318 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 ASCC3Q8N3C0 2202 aaKnown RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 NUAK1O60285 661 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 EVI2BP34910 448 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 CLDN8P56748 225 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 PSMA6P60900 246 aaKnown RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 CREMQ03060 361 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 COQ5Q5HYK3 327 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 XKRXQ6PP77 449 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 TCEANCQ8N8B7 351 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 LILRB4Q8NHJ6 448 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 SH3YL1Q96HL8 342 aaPredicted RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 FEVQ99581 238 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 ARL6Q9H0F7 186 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 THG1LQ9NWX6 298 aaKnown RBP12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 IFT52Q9Y366 437 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 E7EQ34 232 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 SLC31A1O15431 190 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 SCN2BO60939 215 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 B3GALT4O96024 378 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 ACADLP28330 430 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 SLC3A1Q07837 685 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 MAFIPQ8WZ33 124 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 GTF2H4Q92759 462 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 TMEM175Q9BSA9 504 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 TDP1Q9NUW8 608 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 PADI2Q9Y2J8 665 aa12.04□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3DA0A087WVF3 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3IA0A087WXS9 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3EA0A087X179 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3KA0A087X1G2 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3FA6NER0 549 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TTC34A8MYJ7 566 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3LB9A6J9 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 SLC16A8O95907 504 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3HP0C7X1 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 C8orf89P0DMQ9 161 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ACP5P13686 325 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 VAMP1P23763 118 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 C1orf189Q5VU69 101 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3GQ6DHY5 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3CQ6IPX1 549 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 Q6ZPB1 254 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TBC1D3Q8IZP1 549 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 DENND6BQ8NEG7 585 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TSEN15Q8WW01 171 aaKnown RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 GAL3ST3Q96A11 431 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 MS4A12Q9NXJ0 267 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 C5AR2Q9P296 337 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 EXTL2Q9UBQ6 330 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 SDC1P18827 310 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 HOXC13P31276 330 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PITPNAQ00169 270 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 ZNF557Q8N988 423 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 MFSD2AQ8NA29 543 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 CCM2Q9BSQ5 444 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 LINC00597Q9H2U6 94 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TCF7L1Q9HCS4 588 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 RIIAD1A6NNX1 92 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 TMX2-CTNND1H3BSU7 103 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 HLA-DPB1P04440 258 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PTPN2P17706 415 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 PFKLP17858 780 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 CD247P20963 164 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 F8A1P23610 371 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 CCR7P32248 378 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 DSTNP60981 165 aa12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.03□□□□□ -0.48
SLC6A1-201ENST00000287766 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms