RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 KCND3Q9UK17 655 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 KIAA1549LQ6ZVL6 1849 aa12.62□□□□□ -0.39
SLC28A1-201ENST00000286749 A0A1W2PRU2 124 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 H3BN98 237 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 FOXE1O00358 373 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 QSOX1O00391 747 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 LEFTY1O75610 366 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 C1orf105O95561 183 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 C1GALT1C1LP0DN25 315 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 OSMP13725 252 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 CRYBB2P43320 205 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 RECQLP46063 649 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SNRPGP62308 76 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM115Q12893 351 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF79Q15937 498 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF284Q2VY69 593 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 REEP3Q6NUK4 255 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 CEACAM20Q6UY09 585 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF740Q8NDX6 193 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SETD6Q8TBK2 473 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 GLYATL1Q969I3 302 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TMEM80Q96HE8 168 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 CXorf36Q9H7Y0 433 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SPATA7Q9P0W8 599 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TMCC3Q9ULS5 477 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 GRIP1Q9Y3R0 1128 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 UGT2B17O75795 530 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SEMA3DO95025 777 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 ADAP00813 363 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 BCHEP06276 602 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 RORCP51449 518 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 MXD1Q05195 221 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TAB1Q15750 504 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TNFAIP8L2Q6P589 184 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 PAQR6Q6TCH4 344 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 RAB43Q86YS6 212 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 APOBEC4Q8WW27 367 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC6A18Q96N87 628 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 FAM83CQ9BQN1 747 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 EFCAB11Q9BUY7 163 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TIGARQ9NQ88 270 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 MIEF1Q9NQG6 463 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 TAAR2Q9P1P5 351 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SEC14L4Q9UDX3 406 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 PCDHGB2Q9Y5G2 931 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 SNX11Q9Y5W9 270 aa12.61□□□□□ -0.39
SLC28A1-201ENST00000286749 C5orf58C9J3I9 102 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF670-ZNF695F2Z2N8 137 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 OR10H3O60404 316 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 SEMA7AO75326 666 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 HBQ1P09105 142 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 IL7P13232 177 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ENDOUP21128 410 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 OPRD1P41143 372 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 PSPHP78330 225 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF91Q05481 1191 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ZFP69Q49AA0 526 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 HORMAD2Q8N7B1 307 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 MND1Q9BWT6 205 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 RSPO3Q9BXY4 272 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 NLNQ9BYT8 704 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 MTG2Q9H4K7 406 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 STUB1Q9UNE7 303 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 CCL26Q9Y258 94 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 A0A1W2PQ09 198 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 FAM172BPA6NC97 362 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 TFECO14948 347 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 CYP17A1P05093 508 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 TIMP2P16035 220 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 UQCRC2P22695 453 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ELAVL4P26378 380 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 CA8P35219 290 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 MRPS15P82914 257 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 RUNX1T1Q06455 604 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 LIPKQ5VXJ0 399 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 MEDAGQ5VYS4 303 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 THOC7Q6I9Y2 204 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 CASP12Q6UXS9 341 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 DEF8Q6ZN54 512 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 TRIM69Q86WT6 500 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 TCEANCQ8N8B7 351 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 GPR32P1Q8NGA4 272 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 SLC38A5Q8WUX1 472 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 WDR34Q96EX3 536 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 POLR2J2Q9GZM3 115 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 SRRQ9GZT4 340 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 NDUFB11Q9NX14 153 aa12.6□□□□□ -0.39
SLC28A1-201ENST00000286749 XKP51811 444 aa12.59□□□□□ -0.39
SLC28A1-201ENST00000286749 ILKQ13418 452 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms