RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SCRG1O75711 98 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 FTH1P19P0C7X4 201 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 NR2F6P10588 404 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 TSPAN7P41732 249 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 WNT3P56703 355 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 CLDN6P56747 220 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 HES3Q5TGS1 186 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 PRMT9Q6P2P2 845 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 BNC2Q6ZN30 1099 aaPredicted RBP17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 LIN37Q96GY3 246 aaPredicted RBP17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 CDRT15Q96T59 188 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 SLC39A3Q9BRY0 314 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 PRDM9Q9NQV7 894 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 FAM120CQ9NX05 1096 aaKnown RBP17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 CES1P1Q9UKY3 287 aa17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 TMEM184BQ9Y519 407 aaPredicted RBP17.85■□□□□ 0.45
PDLIM3-202ENST00000284770 SPAARA0A1B0GVQ0 90 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 GLOD5A6NK44 160 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 CYR61O00622 381 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 GFRA3O60609 400 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SCN2BO60939 215 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 TIAF1O95411 115 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 CEACAM1P13688 526 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 RAB38P57729 211 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SIM1P81133 766 aaPredicted RBP17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 PRSS53Q2L4Q9 553 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 TRMT5Q32P41 509 aaKnown RBP17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 ANXA8L1Q5VT79 327 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SLC48A1Q6P1K1 146 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 METTL27Q8N6F8 245 aaPredicted RBP17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 FAM47BQ8NA70 645 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 VPS37AQ8NEZ2 397 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 GTF2H4Q92759 462 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 LRRC58Q96CX6 371 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 CSF3RQ99062 836 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SLC7A5P2Q9GIP4 190 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 RPF2Q9H7B2 306 aaKnown RBP17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 RMND5AQ9H871 391 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 GID8Q9NWU2 228 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SLAMF8Q9P0V8 285 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 HCN3Q9P1Z3 774 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 C5AR2Q9P296 337 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 RAPGEFL1Q9UHV5 662 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 PRSS51A0A1B0GVH4 220 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 WASHC1A8K0Z3 465 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 NPPAP01160 153 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SHC2P98077 582 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 NFYCQ13952 458 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 MPEG1Q2M385 716 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 PIGGQ5H8A4 983 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 DLEU7Q6UYE1 221 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 RAB11FIP2Q7L804 512 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 SHISA5Q8N114 240 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 FBXW8Q8N3Y1 598 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 NATD1Q8N6N6 113 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 CTRCQ99895 268 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 HOPXQ9BPY8 73 aaPredicted RBP17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 IL1RL2Q9HB29 575 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 UTS2RQ9UKP6 389 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 LOXL2Q9Y4K0 774 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 MAU2Q9Y6X3 613 aa17.84■□□□□ 0.45
PDLIM3-202ENST00000284770 RNASET2O00584 256 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 PDE5AO76074 875 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 SORBS2O94875 1100 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 HBQ1P09105 142 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 RNH1P13489 461 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 OR1D4P47884 311 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 MAT1AQ00266 395 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 LRRC74AQ0VAA2 488 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 CEACAM7Q14002 265 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 ANKRD46Q86W74 232 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC38A9Q8NBW4 561 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 OR51Q1Q8NH59 317 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 DNAJB14Q8TBM8 379 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 ADAMTS18Q8TE60 1221 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 CIDECQ96AQ7 238 aaPredicted RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 EXOSC8Q96B26 276 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 ITCHQ96J02 903 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 DENND2DQ9H6A0 471 aaPredicted RBP17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 ZNF304Q9HCX3 659 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 SPAG4Q9NPE6 437 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 SERHLQ9NQF3 203 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC39A1Q9NY26 324 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 TMEM181Q9P2C4 612 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 PSME2Q9UL46 239 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 MAN2B2Q9Y2E5 1009 aa17.83■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC30A4O14863 429 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC6A2P23975 617 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 EIF3IQ13347 325 aaKnown RBP17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 DSG2Q14126 1118 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 SYT16Q17RD7 645 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 C1orf189Q5VU69 101 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 OR52E8Q6IFG1 317 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 FAM180BQ6P0A1 224 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 DHDDSQ86SQ9 333 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 HPS6Q86YV9 775 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 PEX11GQ96HA9 241 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC35C2Q9NQQ7 365 aa17.82■□□□□ 0.44
PDLIM3-202ENST00000284770 ABCD2Q9UBJ2 740 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms