RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PRAMEF10O60809 474 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CDH4P55283 916 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 HNRNPA0Q13151 305 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CHIT1Q13231 466 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 LARS2Q15031 903 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 GLYR1Q49A26 553 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SAXO2Q658L1 398 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CHCHD4Q8N4Q1 142 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SYT14Q8NB59 555 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 GPR156Q8NFN8 814 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 NFKBIDQ8NI38 313 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 POP5Q969H6 163 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 MRPL38Q96DV4 380 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SLC22A4Q9H015 551 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CLCA3PQ9Y6N3 262 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 A0A1W2PQL4 384 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FADS2P1A8MWK0 482 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FZD6O60353 706 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 GBAP04062 536 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ANXA8P13928 327 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 EPCAMP16422 314 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RPS3P23396 243 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RORCP51449 518 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RING1Q06587 406 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SCN1BQ07699 218 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FAPQ12884 760 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF177Q13360 481 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 TIMM50Q3ZCQ8 353 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF385BQ569K4 471 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CXorf57Q6NSI4 855 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CERS6Q6ZMG9 384 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 CELF5Q8N6W0 485 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 OR5AK3PQ8NH89 298 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 PIH1D2Q8WWB5 315 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FOXJ1Q92949 421 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 PMEPA1Q969W9 287 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RNF121Q9H920 327 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ZFYVE1Q9HBF4 777 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 ACER3Q9NUN7 267 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 LSM2Q9Y333 95 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 LEUTXA8MZ59 168 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 PRRG1O14668 218 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 APOL3O95236 402 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SCG5P05408 212 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 MAPK1P28482 360 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RPS5P46782 204 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RHOAP61586 193 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SRSF11Q05519 484 aaKnown RBP10.83□□□□□ -0.68
SCLT1-201ENST00000281142 NFE2L1Q14494 772 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 BTBD16Q32M84 506 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FAM180BQ6P0A1 224 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 RDH10Q8IZV5 341 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 VWA5B2Q8N398 1253 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 OR9Q1Q8NGQ5 310 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 DIRAS2Q96HU8 199 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FRMD6Q96NE9 622 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 P2RY13Q9BPV8 354 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 UCK2Q9BZX2 261 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 SH3BP4Q9P0V3 963 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 FTSJ1Q9UET6 329 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 YIPF1Q9Y548 306 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 INSL5Q9Y5Q6 135 aa10.83□□□□□ -0.68
SCLT1-201ENST00000281142 HELZP42694 1942 aaKnown RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 AP2A2O94973 939 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 ITGALP20701 1170 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 MVDP53602 400 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 CDC42P60953 191 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 ASAH1Q13510 395 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 IFI44LQ53G44 452 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 ESCO2Q56NI9 601 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 PYDC2Q56P42 97 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 SLC35F1Q5T1Q4 408 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 C22orf42Q6IC83 251 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 DPY19L3Q6ZPD9 716 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 LSRQ86X29 649 aaPredicted RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 LAS2Q8IYD9 372 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 KREMEN2Q8NCW0 462 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 C9orf43Q8TAL5 461 aaPredicted RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 DEDD2Q8WXF8 326 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 MYO19Q96H55 970 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 TTLL2Q9BWV7 592 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 RDH14Q9HBH5 336 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 GLYATL1P3A0A0U1RQE8 302 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 OR5K3A6NET4 321 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 FABP12A6NFH5 140 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 SMAD6O43541 496 aaKnown RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 NOS1APO75052 506 aaPredicted RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 MSL3P1P0C860 447 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 APEX1P27695 318 aaKnown RBP10.82□□□□□ -0.68
SCLT1-201ENST00000281142 PCGF2P35227 344 aa10.82□□□□□ -0.68
SCLT1-201ENST00000281142 B4GALNT1Q00973 533 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms