RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SAMD12Q8N8I0 201 aa11□□□□□ -0.65
USP53-201ENST00000274030 HAPLN2Q9GZV7 340 aa11□□□□□ -0.65
USP53-201ENST00000274030 C19orf25Q9UFG5 118 aaPredicted RBP11□□□□□ -0.65
USP53-201ENST00000274030 CMAHPQ9Y471 501 aa11□□□□□ -0.65
USP53-201ENST00000274030 NFAT5O94916 1531 aa11□□□□□ -0.65
USP53-201ENST00000274030 HTR3EA5X5Y0 456 aa11□□□□□ -0.65
USP53-201ENST00000274030 FOXD2O60548 495 aaPredicted RBP11□□□□□ -0.65
USP53-201ENST00000274030 PFKLP17858 780 aa11□□□□□ -0.65
USP53-201ENST00000274030 RBM34P42696 430 aaKnown RBP11□□□□□ -0.65
USP53-201ENST00000274030 ZXDBP98169 803 aa11□□□□□ -0.65
USP53-201ENST00000274030 RING1Q06587 406 aa11□□□□□ -0.65
USP53-201ENST00000274030 VMACQ2NL98 169 aa11□□□□□ -0.65
USP53-201ENST00000274030 C1orf189Q5VU69 101 aa11□□□□□ -0.65
USP53-201ENST00000274030 TMEM25Q86YD3 366 aa11□□□□□ -0.65
USP53-201ENST00000274030 NLGN4XQ8N0W4 816 aa11□□□□□ -0.65
USP53-201ENST00000274030 OR8K5Q8NH50 307 aa11□□□□□ -0.65
USP53-201ENST00000274030 GRPEL2Q8TAA5 225 aa11□□□□□ -0.65
USP53-201ENST00000274030 ZNF675Q8TD23 568 aa11□□□□□ -0.65
USP53-201ENST00000274030 WDR92Q96MX6 357 aa11□□□□□ -0.65
USP53-201ENST00000274030 TREM1Q9NP99 234 aa11□□□□□ -0.65
USP53-201ENST00000274030 NANSQ9NR45 359 aa11□□□□□ -0.65
USP53-201ENST00000274030 MYH2Q9UKX2 1941 aa11□□□□□ -0.65
USP53-201ENST00000274030 CD70P32970 193 aa11□□□□□ -0.65
USP53-201ENST00000274030 ELOCQ15369 112 aa11□□□□□ -0.65
USP53-201ENST00000274030 FAM214AQ32MH5 1076 aa11□□□□□ -0.65
USP53-201ENST00000274030 INAVAQ3KP66 663 aa11□□□□□ -0.65
USP53-201ENST00000274030 LRIT3Q3SXY7 679 aa11□□□□□ -0.65
USP53-201ENST00000274030 GTF2IRD2BQ6EKJ0 949 aa11□□□□□ -0.65
USP53-201ENST00000274030 GTF2IRD2Q86UP8 949 aa11□□□□□ -0.65
USP53-201ENST00000274030 PLCZ1Q86YW0 608 aa11□□□□□ -0.65
USP53-201ENST00000274030 UBQLNLQ8IYU4 475 aa11□□□□□ -0.65
USP53-201ENST00000274030 THAP6Q8TBB0 222 aa11□□□□□ -0.65
USP53-201ENST00000274030 ERVK-18Q9QC07 812 aa11□□□□□ -0.65
USP53-201ENST00000274030 DKK3Q9UBP4 350 aa11□□□□□ -0.65
USP53-201ENST00000274030 ZFR2Q9UPR6 939 aaKnown RBP11□□□□□ -0.65
USP53-201ENST00000274030 FAM221BA6H8Z2 402 aa11□□□□□ -0.65
USP53-201ENST00000274030 TFPTP0C1Z6 253 aa11□□□□□ -0.65
USP53-201ENST00000274030 OR4D2P58180 307 aa11□□□□□ -0.65
USP53-201ENST00000274030 DHCR24Q15392 516 aa11□□□□□ -0.65
USP53-201ENST00000274030 CRTC1Q6UUV9 634 aa11□□□□□ -0.65
USP53-201ENST00000274030 FAM86B1Q8N7N1 296 aa11□□□□□ -0.65
USP53-201ENST00000274030 OR5P2Q8WZ92 322 aa11□□□□□ -0.65
USP53-201ENST00000274030 ZUFSPQ96AP4 578 aa11□□□□□ -0.65
USP53-201ENST00000274030 FAM83CQ9BQN1 747 aa11□□□□□ -0.65
USP53-201ENST00000274030 C5AR2Q9P296 337 aa11□□□□□ -0.65
USP53-201ENST00000274030 ALG5Q9Y673 324 aa11□□□□□ -0.65
USP53-201ENST00000274030 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 NPPAP01160 153 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 JUNDP17535 347 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 HOXA11P31270 313 aaPredicted RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 ACVR1BP36896 505 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 NFE2L1Q14494 772 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP53-201ENST00000274030 CLECL1Q8IZS7 167 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ZFP41Q8N8Y5 198 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 AVL9Q8NBF6 648 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 HUS1BQ8NHY5 278 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 PPP1R14BQ96C90 147 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 OR1F2PQ96R84 312 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SECISBP2Q96T21 854 aaKnown RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 TPSD1Q9BZJ3 242 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ZBTB20Q9HC78 741 aaPredicted RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 MOV10Q9HCE1 1003 aaKnown RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 FKBP14Q9NWM8 211 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 IL20RAQ9UHF4 553 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 A0A096LPI6 279 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SLC33A1O00400 549 aaPredicted RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 FLRT2O43155 660 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SDC3O75056 442 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 C6P13671 934 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 F8A1P23610 371 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 KCNC1P48547 511 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SEC23BQ15437 767 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SLC27A4Q6P1M0 643 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 C6orf120Q7Z4R8 191 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 DOHHQ9BU89 302 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 MLXQ9UH92 298 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ADAMTS6Q9UKP5 1117 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 CA14Q9ULX7 337 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 CNTRLQ7Z7A1 2325 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 FESP07332 822 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ADORA3P0DMS8 318 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 KDELR2P33947 212 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 RFC2P35250 354 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ENTPD1P49961 510 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 SIM1P81133 766 aaPredicted RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 RAB12Q6IQ22 244 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ZFAND4Q86XD8 727 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ZC3H3Q8IXZ2 948 aaKnown RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 PNPLA2Q96AD5 504 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 MKLN1Q9UL63 735 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 GPR34Q9UPC5 381 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 PRRC2BQ5JSZ5 2229 aaKnown RBP10.99□□□□□ -0.65
USP53-201ENST00000274030 CEACAM7Q14002 265 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 ZMYND11Q15326 602 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 PDSS1Q5T2R2 415 aa10.99□□□□□ -0.65
USP53-201ENST00000274030 CHST14Q8NCH0 376 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms