RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 OR4Q2P0C623 313 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 HTR1EP28566 365 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TMIGD1Q6UXZ0 262 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PIM3Q86V86 326 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FAM110BQ8TC76 370 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 HOXB13Q92826 284 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM185BQ9H7F4 350 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 NAP1L6A6NFF2 107 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SSX5O60225 188 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CDKN1CP49918 316 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF84P51523 738 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM35AQ53FP2 167 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 URM1Q9BTM9 101 aaKnown RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MGAT4CQ9UBM8 478 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 B4GALT7Q9UBV7 327 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 OARD1Q9Y530 152 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 NUP205Q92621 2012 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 C2orf74A8MZ97 194 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 J3QRK9 145 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MMP20O60882 483 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FHP07954 510 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FBXL22Q6P050 247 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PNCKQ6P2M8 343 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 C22orf39Q6P5X5 142 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 AGTRAPQ6RW13 159 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 KREMEN2Q8NCW0 462 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FBXL8Q96CD0 374 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CHFRQ96EP1 664 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 AMBNQ9NP70 447 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FARS2O95363 451 aaKnown RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CAPN3P20807 821 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MAGEA11P43364 429 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 KCNC1P48547 511 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 DGKQP52824 942 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PLGLB1Q02325 96 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FLYWCH1Q4VC44 716 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 LIPKQ5VXJ0 399 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PXKQ7Z7A4 578 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SLC22A14Q9Y267 594 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SVILO95425 2214 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ARPC4-TTLL3A0A0A6YYG9 625 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM233B4DJY2 109 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FLT3LGP49771 235 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 RPS3AP61247 264 aaKnown RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 AMZ1Q400G9 498 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 C7orf61Q8IZ16 206 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 OR2AP1Q8NGE2 309 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 OR13C3Q8NGS6 347 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 OR14K1Q8NGZ2 314 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CLEC4DQ8WXI8 215 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SEC61A2Q9H9S3 476 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ATRNL1Q5VV63 1379 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SLC35F4A4IF30 521 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CXorf49A8MYA2 514 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 PCDH17O14917 1159 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SYNGR4O95473 234 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CST3P01034 146 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ACP5P13686 325 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 DLSTP36957 453 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SUOXP51687 545 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 NUDT6P53370 316 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TAS2R31P59538 309 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 LBX2Q6XYB7 198 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 WDR53Q7Z5U6 358 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ARL14EPQ8N8R7 260 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 OR4F6Q8NGB9 312 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 THEM6Q8WUY1 208 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 POLDIP3Q9BY77 421 aaKnown RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 RAB9BQ9NP90 201 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 PCDHGA8Q9Y5G5 932 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 A0A1B0GVT2 93 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 DIRAS3O95661 229 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 IFNGR1P15260 489 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 IL1R2P27930 398 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF678Q5SXM1 525 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ARHGAP40Q5TG30 622 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 YIPF4Q9BSR8 244 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SLC17A6Q9P2U8 582 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 OR51F1A6NGY5 319 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SLC22A31A6NKX4 558 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CLEC3AO75596 197 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 DLDP09622 509 aaKnown RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CLCNKAP51800 687 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 HK3P52790 923 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 CHPT1Q8WUD6 406 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 MRI1Q9BV20 369 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 SLA2Q9H6Q3 261 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 KCNS2Q9ULS6 477 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 OPN1SWP03999 348 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 IFNA4P05014 189 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 ARL6IP1Q15041 203 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 GDPD1Q8N9F7 314 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 OR5T2Q8NGG2 359 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TRUB1Q8WWH5 349 aaKnown RBP7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM125Q96AQ2 219 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM68Q96MH6 324 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 VNN3Q9NY84 501 aa7.67□□□□□ -1.18
LIMD1-201ENST00000273317 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms