RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 A0A0G2JNG1 304 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 KIR2DS3K7RE56 304 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 M0QX08 132 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 PGRMC2O15173 223 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 CTSVO60911 334 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF217O75362 1048 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 OPN1SWP03999 348 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 FPR1P21462 350 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 DNAJA1P31689 397 aaKnown RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 RPS26P62854 115 aaKnown RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 KIR2DS5Q14953 304 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 FCRL6Q6DN72 434 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 CEACAM20Q6UY09 585 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 TMEM26Q6ZUK4 368 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 C6orf120Q7Z4R8 191 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 ASPGQ86U10 573 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 DCP2Q8IU60 420 aaKnown RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 ZC3H7AQ8IWR0 971 aaKnown RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SLC30A8Q8IWU4 369 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 ARL10Q8N8L6 244 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 KCT2Q8NC54 265 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 GAL3ST3Q96A11 431 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 OR2A5Q96R48 311 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 TPSD1Q9BZJ3 242 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 A4GALTQ9NPC4 353 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 CES1P1Q9UKY3 287 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 BAG5Q9UL15 447 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 KLK4Q9Y5K2 254 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SMIM31A0A1B0GVY4 71 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 A0A1W2PPC1 479 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 FAM221BA6H8Z2 402 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 TRIM64CA6NLI5 447 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 OR5K4A6NMS3 321 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 HS6ST1O60243 411 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 GUCY1B2O75343 617 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SEC24DO94855 1032 aaPredicted RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 AIFM1O95831 613 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 PIGAP37287 484 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SNRPNP63162 240 aaKnown RBP15.75■□□□□ 0.11
CCDC40-201ENST00000269318 NADK2Q4G0N4 442 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 OR10G6Q8NH81 332 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SLC37A2Q8TED4 501 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 HLA-CQ95604 372 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 NRBF2Q96F24 287 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 SLC6A18Q96N87 628 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 GRIP2Q9C0E4 1043 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 CHRDQ9H2X0 955 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 C3orf18Q9UK00 162 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 PILRAQ9UKJ1 303 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 ANGPT4Q9Y264 503 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 DNAH14Q0VDD8 3507 aa15.75■□□□□ 0.11
CCDC40-201ENST00000269318 ARHGEF17Q96PE2 2063 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-201ENST00000269318 GSAPA4D1B5 854 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 KRBA1A5PL33 1030 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 GLOD5A6NK44 160 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 MYO1GB0I1T2 1018 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 PROM1O43490 865 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 CCT3P49368 545 aaKnown RBP15.74■□□□□ 0.11
CCDC40-201ENST00000269318 NR1H2P55055 460 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 TUBA4AP68366 448 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 KCNAB2Q13303 367 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 LAPTM4AQ15012 233 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 ZC3H12BQ5HYM0 836 aaKnown RBP15.74■□□□□ 0.11
CCDC40-201ENST00000269318 TTC23Q5W5X9 447 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 C18orf63Q68DL7 685 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 TNFAIP8L2Q6P589 184 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-201ENST00000269318 CYP4Z1Q86W10 505 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 KLHDC7BQ96G42 594 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 SERHL2Q9H4I8 314 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 LTB4R2Q9NPC1 389 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 NDUFAF4Q9P032 175 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 ANKMY1Q9P2S6 941 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 FBXW2Q9UKT8 454 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 SAMHD1Q9Y3Z3 626 aaKnown RBP15.74■□□□□ 0.11
CCDC40-201ENST00000269318 ENTPD2Q9Y5L3 495 aa15.74■□□□□ 0.11
CCDC40-201ENST00000269318 PRAMEF25A6NGN4 478 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 TFPTP0C1Z6 253 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SMIM10L1P0DMW3 83 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 LSSP48449 732 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 RGS1Q08116 209 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 TGM3Q08188 693 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 MAPK11Q15759 364 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 RFX4Q33E94 735 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 LEXMQ3ZCV2 418 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SPDYE7PQ495Y7 208 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 IFI44LQ53G44 452 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 PTCRAQ6ISU1 281 aaPredicted RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 REEP3Q6NUK4 255 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SLC48A1Q6P1K1 146 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 FIGLAQ6QHK4 219 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 DGLUCYQ7Z3D6 616 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 TAF8Q7Z7C8 310 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 PARGQ86W56 976 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SUN3Q8TAQ9 357 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 FAM174AQ8TBP5 190 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 UTP15Q8TED0 518 aaKnown RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SLC38A5Q8WUX1 472 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 CNRIP1Q96F85 164 aaPredicted RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SMIM10Q96HG1 83 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms