RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SYCE1LA8MT33 242 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CXorf49A8MYA2 514 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 K7EPI3 171 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 RTCAO00442 366 aaKnown RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CYR61O00622 381 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PRKNO60260 465 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 GFAPP14136 432 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 HIST1H1TP22492 207 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ATP5A1P25705 553 aaKnown RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 STX2P32856 288 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 BUD31P41223 144 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 HK2P52789 917 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PLTPP55058 493 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 KCNJ2P63252 427 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 RNF4P78317 190 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PLIN5Q00G26 463 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CAV1Q03135 178 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 SLAMF1Q13291 335 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 SLC10A1Q14973 349 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CDSNQ15517 529 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 UAP1Q16222 522 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ADPRMQ3LIE5 342 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 GXYLT1Q4G148 440 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 WLSQ5T9L3 541 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 C6orf163Q5TEZ5 329 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ADNP2Q6IQ32 1131 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 KLC3Q6P597 504 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CYP20A1Q6UW02 462 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 SLC29A4Q7RTT9 530 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 FGD2Q7Z6J4 655 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 OR4N5Q8IXE1 308 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CLYBLQ8N0X4 340 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ARMC10Q8N2F6 343 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 LIX1Q8N485 282 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 FAM109AQ8N4B1 249 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 TEX9Q8N6V9 391 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PDPRQ8NCN5 879 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ATP6V1E2Q96A05 226 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 RGMAQ96B86 450 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 REPS1Q96D71 796 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 C14orf79Q96F83 325 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 GAL3ST4Q96RP7 486 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 MAPKAP1Q9BPZ7 522 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ZNF559Q9BR84 538 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 CNPPD1Q9BV87 410 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 TTTY12Q9BZ98 90 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 RAB17Q9H0T7 212 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 IL1RL2Q9HB29 575 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 MCCC2Q9HCC0 563 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ADGRE2Q9UHX3 823 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PHF11Q9UIL8 331 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ZNF223Q9UK11 482 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PTBP2Q9UKA9 531 aaKnown RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ZNF490Q9ULM2 529 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 PPIEQ9UNP9 301 aaKnown RBP11.36□□□□□ -0.59
TRAF4-202ENST00000262396 RNF6Q9Y252 685 aa11.36□□□□□ -0.59
TRAF4-202ENST00000262396 ABCA12Q86UK0 2595 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 NKX2-6A6NCS4 301 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 FAM47E-STBD1D6RA91 191 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 TGFBR3LH3BV60 316 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 UBXN8O00124 270 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 ZWINTO95229 277 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 LTA4HP09960 611 aaKnown RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 CASQ1P31415 396 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 C2orf54Q08AI8 447 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 ASPHQ12797 758 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 BIKQ13323 160 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 TBCCQ15814 346 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 FAM83EQ2M2I3 478 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 KHDRBS2Q5VWX1 349 aaKnown RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 CES4AQ5XG92 561 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 HLA-DQA1Q5Y7H0 255 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 OR4C11Q6IEV9 310 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 B3GNT6Q6ZMB0 384 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 CCDC71Q8IV32 467 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 ZNF295-AS1Q8N0V1 137 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 GOLM1Q8NBJ4 401 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 FAM13CQ8NE31 585 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 OR8K3Q8NH51 312 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 LILRB4Q8NHJ6 448 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 SARAFQ96BY9 339 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 SCYL1Q96KG9 808 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 PELOQ9BRX2 385 aaKnown RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 MS4A8Q9BY19 250 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 UCK2Q9BZX2 261 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 OR51B5Q9H339 312 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 RPF2Q9H7B2 306 aaKnown RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 PRDM7Q9NQW5 492 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 B4GALT7Q9UBV7 327 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 BOKQ9UMX3 212 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-202ENST00000262396 ACOT9Q9Y305 439 aa11.35□□□□□ -0.59
TRAF4-202ENST00000262396 OR14I1A6ND48 311 aa11.34□□□□□ -0.59
TRAF4-202ENST00000262396 FAM159BA6NKW6 160 aa11.34□□□□□ -0.59
TRAF4-202ENST00000262396 ADAM10O14672 748 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms