RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ELOVL6Q9H5J4 265 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 PADI2Q9Y2J8 665 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 DYRK1BQ9Y463 629 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 ZNF839A8K0R7 811 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 C9J4A7 227 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 H0YIV9 168 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 CCL21O00585 134 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 FBP2O00757 339 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 KDM1AO60341 852 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 NRP2O60462 931 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 RSL1D1O76021 490 aaKnown RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 IGHEP01854 428 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 ART1P52961 327 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 HMGCS1Q01581 520 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 ZNF169Q14929 603 aaPredicted RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 PLCL1Q15111 1095 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 IMPG1Q17R60 797 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 RFTN2Q52LD8 501 aaPredicted RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 SGO1Q5FBB7 561 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 FRG2Q64ET8 278 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 ATG9BQ674R7 924 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 REP15Q6BDI9 236 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 LCTLQ6UWM7 567 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 HACD2Q6Y1H2 254 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 PGAM4Q8N0Y7 254 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 WDR20Q8TBZ3 569 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 CHTF18Q8WVB6 975 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 NEIL2Q969S2 332 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 FRG2BQ96QU4 278 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 NPAS2Q99743 824 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 MENTQ9BUN1 341 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 C1orf50Q9BV19 199 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 TMUB1Q9BVT8 246 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 MRPL1Q9BYD6 325 aaKnown RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 ACPTQ9BZG2 426 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 DENND2DQ9H6A0 471 aaPredicted RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 LRTM1Q9HBL6 345 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 SLC52A3Q9NQ40 469 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 OLAHQ9NV23 265 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 C1orf109Q9NX04 203 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 SOHLH2Q9NX45 425 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 NOP53Q9NZM5 478 aaKnown RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 BAIAP2L1Q9UHR4 511 aa12.57□□□□□ -0.4
SGCA-201ENST00000262018 PRPF19Q9UMS4 504 aaKnown RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 TDRKHQ9Y2W6 561 aaKnown RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.57□□□□□ -0.4
SGCA-201ENST00000262018 HSD3B1P14060 373 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 PCSK2P16519 638 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 HSD3B2P26439 372 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 ZFP36L2P47974 494 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 RPL38P63173 70 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 TLE4Q04727 773 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 TBL3Q12788 808 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 CSTF3Q12996 717 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 SSPNQ14714 243 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 TRMT5Q32P41 509 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 COQ5Q5HYK3 327 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 IL23RQ5VWK5 629 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 KLHL35Q6PF15 583 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 CYP20A1Q6UW02 462 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 RPTNQ6XPR3 784 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 BCORP1Q8N888 145 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 C14orf79Q96F83 325 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 CMTM7Q96FZ5 175 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 IL17FQ96PD4 163 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 GBP5Q96PP8 586 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 CD180Q99467 661 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 HAUS8Q9BT25 410 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 ATP13A2Q9NQ11 1180 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 P4HTMQ9NXG6 502 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 BCAP29Q9UHQ4 241 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 EIF3LQ9Y262 564 aaKnown RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 POLR3HQ9Y535 204 aaPredicted RBP12.56□□□□□ -0.4
SGCA-201ENST00000262018 PCDHGA11Q9Y5H2 935 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 PCM1Q15154 2024 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 SPTBP11277 2137 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 CNTRLQ7Z7A1 2325 aa12.56□□□□□ -0.4
SGCA-201ENST00000262018 FAM234BA2RU67 622 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 C19orf84I3L1E1 186 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 NR5A2O00482 541 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 MRASO14807 208 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 ANKRD28O15084 1053 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 SLC22A3O75751 556 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 CIB2O75838 187 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 ZBTB11O95625 1053 aaPredicted RBP12.55□□□□□ -0.4
SGCA-201ENST00000262018 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 C1GALT1C1LP0DN25 315 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 ACPPP15309 386 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 NEK2P51955 445 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 NME5P56597 212 aa12.55□□□□□ -0.4
SGCA-201ENST00000262018 UFM1P61960 85 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms