RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PRAP1Q96NZ9 151 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 RPF2Q9H7B2 306 aaKnown RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 DLGAP1O14490 977 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
CUX2-201ENST00000261726 HSD11B2P80365 405 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 COL28A1Q2UY09 1125 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 TMEM151BQ8IW70 566 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 CYP8B1Q9UNU6 501 aa13.75□□□□□ -0.21
CUX2-201ENST00000261726 TOXO94900 526 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 UGT2B10P36537 528 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 PTGR1Q14914 329 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 OR4K14Q8NGD5 310 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 MSANTD3Q96H12 275 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 CD244Q9BZW8 370 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 PPP4R1LQ9P1A2 415 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 ST14Q9Y5Y6 855 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 GGT2P36268 569 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 CTBP2P56545 445 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 TBRG1Q3YBR2 411 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 AVL9Q8NBF6 648 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 KLHDC7BQ96G42 594 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 SYT4Q9H2B2 425 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 NSUN3Q9H649 340 aaKnown RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 CD8B2A6NJW9 211 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 TBX10O75333 385 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 SCGB2A1O75556 95 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 CLIC3O95833 236 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 CD8BP10966 210 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 ZNF30P17039 623 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 AOC1P19801 751 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 AGTR2P50052 363 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 CASP6P55212 293 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 GINS1Q14691 196 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 PLGLAQ15195 96 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 NLGN4YQ8NFZ3 816 aaPredicted RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 DNTTIP1Q9H147 329 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 FAM124BQ9H5Z6 455 aaPredicted RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 HCN4Q9Y3Q4 1203 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 POU3F4P49335 361 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 PLEKHN1Q494U1 663 aaPredicted RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 C22orf39Q6P5X5 142 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 DRICH1Q6PGQ1 229 aaPredicted RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 ZNF442Q9H7R0 627 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 SRA1Q9HD15 236 aaKnown RBP13.74□□□□□ -0.21
CUX2-201ENST00000261726 SLC2A4RGQ9NR83 387 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 UBQLN2Q9UHD9 624 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 EDARQ9UNE0 448 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 ZNF175Q9Y473 711 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 PCDHGA8Q9Y5G5 932 aa13.74□□□□□ -0.21
CUX2-201ENST00000261726 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TNFSF12O43508 249 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 RBBP9O75884 186 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 HOXB9P17482 250 aaPredicted RBP13.73□□□□□ -0.21
CUX2-201ENST00000261726 MAP2K4P45985 399 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 CRISP1P54107 249 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 SRYQ05066 204 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 REEP3Q6NUK4 255 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 IL22RA1Q8N6P7 574 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 PACRGLQ8N7B6 248 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 ZNF675Q8TD23 568 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TRIB2Q92519 343 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 P2RY13Q9BPV8 354 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 MGAT4BQ9UQ53 548 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 ADAM18Q9Y3Q7 739 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 AKR1C4P17516 323 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 ZNF616Q08AN1 781 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 GPRC6AQ5T6X5 926 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 CEACAM19Q7Z692 300 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TMPRSS12Q86WS5 348 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 ACTR3BQ9P1U1 418 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 INSL6Q9Y581 213 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TCRBV21S2A2A0A5A6 115 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 UNC119BA6NIH7 251 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 SLITRK5O94991 958 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 CSTAP01040 98 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 CELP19835 753 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 CFAP77Q6ZQR2 320 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 OR56A3Q8NH54 315 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 NEIL3Q8TAT5 605 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 GLYATL2Q8WU03 294 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TGM7Q96PF1 710 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 YTHDF1Q9BYJ9 559 aaKnown RBP13.73□□□□□ -0.21
CUX2-201ENST00000261726 LRRC42Q9Y546 428 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 SHOXO15266 292 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 FBLP22087 321 aaKnown RBP13.73□□□□□ -0.21
CUX2-201ENST00000261726 GID4Q8IVV7 300 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 ARL14Q8N4G2 192 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
CUX2-201ENST00000261726 TMEM234Q8WY98 164 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms