RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CCDC80Q76M96 950 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 UBE3DQ7Z6J8 389 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 HSPBAP1Q96EW2 488 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 PHF7Q9BWX1 381 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 GABARAPL3Q9BY60 117 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 NLNQ9BYT8 704 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 FBXL12Q9NXK8 326 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 RHCGQ9UBD6 479 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 HSPE1-MOB4S4R3N1 261 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 A0A1W2PQF6 199 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 CAPN5O15484 640 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 NDUFS4O43181 175 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 BCAS1O75363 584 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 SEMA3DO95025 777 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 KRT75O95678 551 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 RECKO95980 971 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 COL9A1P20849 921 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 DRD1P21728 446 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 CD72P21854 359 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 MANFP55145 182 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 CLCA4Q14CN2 919 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 CRB2Q5IJ48 1285 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 LZICQ8WZA0 190 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 RAB8BQ92930 207 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 AICDAQ9GZX7 198 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 GPN2Q9H9Y4 310 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 ICKQ9UPZ9 632 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 RNF6Q9Y252 685 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 TPRKBQ9Y3C4 175 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 COL4A2P08572 1712 aa17.78■□□□□ 0.44
PDLIM4-201ENST00000253754 E9PQ18 207 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 PDPK1O15530 556 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 PRKRAO75569 313 aaKnown RBP17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 BCHEP06276 602 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 POU2F1P14859 743 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 SLC19A1P41440 591 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 CSNK1G2P78368 415 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 DGCR6Q14129 220 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 DUSP7Q16829 419 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 KLHL35Q6PF15 583 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 LGI4Q8N135 537 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 DNASE1L2Q92874 299 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 RSPO3Q9BXY4 272 aaPredicted RBP17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 ENPP5Q9UJA9 477 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 AP1M2Q9Y6Q5 423 aa17.77■□□□□ 0.44
PDLIM4-201ENST00000253754 A0A0J9YVX5 310 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 TRBC2A0A5B9 178 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 PCDH17O14917 1159 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 BCL10O95999 233 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 CXCR2P25025 360 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 PTGER1P34995 402 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 AHSA2Q719I0 299 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 OR14C36Q8NHC7 312 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 JPH3Q8WXH2 748 aaPredicted RBP17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 TEFMQ96QE5 360 aaKnown RBP17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 C17orf62Q9BQA9 187 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 SCN3BQ9NY72 215 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 SPATA7Q9P0W8 599 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 ANGPT4Q9Y264 503 aa17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 DNMT3AQ9Y6K1 912 aaPredicted RBP17.77■□□□□ 0.43
PDLIM4-201ENST00000253754 A0A1W2PQU0 124 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 TTC36A6NLP5 189 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 M0R129 80 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 DNTTP04053 509 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 CEACAM5P06731 702 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 HSD17B2P37059 387 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 CTF1Q16619 201 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC38A5Q8WUX1 472 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 RORBQ92753 470 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 HRASLS5Q96KN8 279 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 CAMK1GQ96NX5 476 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 ZNF347Q96SE7 839 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 PLGRKTQ9HBL7 147 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 PHPT1Q9NRX4 125 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 THSD1Q9NS62 852 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 ACSL5Q9ULC5 683 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 PCDHGB1Q9Y5G3 927 aa17.76■□□□□ 0.43
PDLIM4-201ENST00000253754 ALDH4A1P30038 563 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 XCR1P46094 333 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 CXCR4P61073 352 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 HEPACAMQ14CZ8 416 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 MICAQ29983 383 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PROX2Q3B8N5 592 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 SAXO2Q658L1 398 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PAGE2Q7Z2X7 111 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 NUDT13Q86X67 352 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 OR2A1Q8NGT9 310 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 FAM81AQ8TBF8 368 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 GEMIN6Q8WXD5 167 aaKnown RBP17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 NEURL3Q96EH8 262 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PCBD2Q9H0N5 130 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 KLHL31Q9H511 634 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 AMBNQ9NP70 447 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 SIRT3Q9NTG7 399 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 FAM227AF5H4B4 570 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 RGS10O43665 173 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 INHBBP09529 407 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 IGFALSP35858 605 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PCBP4P57723 403 aaKnown RBP17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 LSM3P62310 102 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms