RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TCF25Q9BQ70 676 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SPRTNQ9H040 489 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 EVA1AQ9H8M9 152 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 KIAA1522Q9P206 1035 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC27A5Q9Y2P5 690 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ANKRD34BA5PLL1 514 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OR6C70A6NIJ9 312 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HAX1O00165 279 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RNASET2O00584 256 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CRYZL1O95825 349 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 IFNA16P05015 189 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PRKAR2AP13861 404 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GABRB1P18505 474 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 NTSP30990 170 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HOXA9P31269 272 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FAUP35544 74 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TGFBR2P37173 567 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 XKP51811 444 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC7A9P82251 487 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CDK6Q00534 326 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HSF2Q03933 536 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 UBXN2BQ14CS0 331 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GPAT3Q53EU6 434 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 C6orf183Q5T699 404 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HTR3DQ70Z44 454 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RBM23Q86U06 439 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 IL17RCQ8NAC3 791 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FRS2Q8WU20 508 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SMG7Q92540 1137 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 KCTD12Q96CX2 325 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RADILQ96JH8 1075 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 DPAGT1Q9H3H5 408 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SGK2Q9HBY8 427 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SEMA3GQ9NS98 782 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GPATCH2Q9NW75 528 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ALKBH4Q9NXW9 302 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MBD2Q9UBB5 411 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CDV3Q9UKY7 258 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SPEF1Q9Y4P9 236 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CORINQ9Y5Q5 1042 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ZFP37Q9Y6Q3 630 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ENPP4Q9Y6X5 453 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM127O75204 238 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 H1F0P07305 194 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 STOMP27105 288 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ACSL1P33121 698 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CTNNB1P35222 781 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GMFBP60983 142 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 BTG1P62324 171 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SELENBP1Q13228 472 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 DDX39BQ13838 428 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RAB33AQ14088 237 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OR4F3Q6IEY1 312 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 KIAA1211LQ6NV74 962 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF782Q6ZMW2 699 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC39A11Q8N1S5 342 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 KLHL36Q8N4N3 616 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TOR1AIP2Q8NFQ8 470 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SUN3Q8TAQ9 357 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 WDR20Q8TBZ3 569 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 NETO1Q8TDF5 533 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MOAP1Q96BY2 351 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 C1GALT1C1Q96EU7 318 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC12A9Q9BXP2 914 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLIRPQ9GZT3 109 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 POLR2J3Q9H1A7 115 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 BRD9Q9H8M2 597 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TOR4AQ9NXH8 423 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 VNN3Q9NY84 501 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 B3GNT2Q9NY97 397 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PPT2Q9UMR5 302 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HS3ST2Q9Y278 367 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MYOFQ9NZM1 2061 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 ANKDD1BA6NHY2 528 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 FGBP02675 491 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 SCG5P05408 212 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 URODP06132 367 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 RB1P06400 928 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 POU2F2P09086 479 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 ERGP11308 486 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 OSMP13725 252 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 PRKACGP22612 351 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 F8A1P23610 371 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 EPHB3P54753 998 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 DSTNP60981 165 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 SNRPGP62308 76 aaKnown RBP3.96□□□□□ -1.77
UBE4A-201ENST00000252108 SLC13A2Q13183 592 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 AQP6Q13520 282 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 DSG2Q14126 1118 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 EFR3AQ14156 821 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 LRIT3Q3SXY7 679 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 DGKKQ5KSL6 1271 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 ADGRF1Q5T601 910 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 CROCCQ5TZA2 2017 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 RNLSQ5VYX0 342 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 SLC36A4Q6YBV0 504 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 RAVER1Q8IY67 606 aaKnown RBP3.96□□□□□ -1.77
UBE4A-201ENST00000252108 NRSN1Q8IZ57 195 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 NXPE1Q8N323 547 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 FAM109AQ8N4B1 249 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms