RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 OR2M7Q8NG81 312 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 SLC2A12Q8TD20 617 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 ASB5Q8WWX0 329 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 CMTM7Q96FZ5 175 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 SGCZQ96LD1 299 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 RAB17Q9H0T7 212 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 DEFB127Q9H1M4 99 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 TP63Q9H3D4 680 aaPredicted RBP19.54■□□□□ 0.72
NEDD8-201ENST00000250495 DEPPQ9NTK1 212 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 SUPT3HB4E1H0 165 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 RTCAO00442 366 aaKnown RBP19.53■□□□□ 0.72
NEDD8-201ENST00000250495 KERAO60938 352 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 SUPT3HO75486 399 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 FAM155BO75949 473 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 SCELO95171 688 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 LTA4HP09960 611 aaKnown RBP19.53■□□□□ 0.72
NEDD8-201ENST00000250495 SLC35E2BP0CK96 405 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 COX7A2P14406 83 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 EPB42P16452 691 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 CNR1P21554 472 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 STX2P32856 288 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 SSR2P43308 183 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 MAGEA4P43358 317 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 SLMAPQ14BN4 828 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 ZNF750Q32MQ0 723 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 DEPDC1Q5TB30 811 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 OPN5Q6U736 354 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 RTL4Q6ZR62 310 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 CMC1Q7Z7K0 106 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 SLC22A16Q86VW1 577 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 CCDC25Q86WR0 208 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 OR7G3Q8NG95 312 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 ATOH8Q96SQ7 321 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 CENPKQ9BS16 269 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 ENKD1Q9H0I2 346 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 MS4A12Q9NXJ0 267 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 COPS7AQ9UBW8 275 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 ACOT9Q9Y305 439 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 HRH3Q9Y5N1 445 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 ZNF407Q9C0G0 2248 aa19.53■□□□□ 0.72
NEDD8-201ENST00000250495 DNAJC13O75165 2243 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 UBXN8O00124 270 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 SH3BGRLO75368 114 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 C2orf54Q08AI8 447 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 DLG1Q12959 904 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 NAB1Q13506 487 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 NDUFAF5Q5TEU4 345 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 KHDRBS2Q5VWX1 349 aaKnown RBP19.52■□□□□ 0.72
NEDD8-201ENST00000250495 OR4C11Q6IEV9 310 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 GK5Q6ZS86 529 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 CEP128Q6ZU80 1094 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 CCDC91Q7Z6B0 441 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 ZNF321PQ8N8H1 164 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 GOLM1Q8NBJ4 401 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 FBF1Q8TES7 1133 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 UBTD2Q8WUN7 234 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 CHTF18Q8WVB6 975 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 RGMAQ96B86 450 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 ANKRD9Q96BM1 317 aaPredicted RBP19.52■□□□□ 0.72
NEDD8-201ENST00000250495 C14orf79Q96F83 325 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 RBM18Q96H35 190 aaKnown RBP19.52■□□□□ 0.72
NEDD8-201ENST00000250495 FAM173AQ9BQD7 235 aa19.52■□□□□ 0.72
NEDD8-201ENST00000250495 PINLYPA6NC86 204 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 SYCE1LA8MT33 242 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 DYRK3O43781 588 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 GMPRP36959 345 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 ID2Q02363 134 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 SLAMF1Q13291 335 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 GRHL2Q6ISB3 625 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 RHEBL1Q8TAI7 183 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 FBXO25Q8TCJ0 367 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 ZNF721Q8TF20 911 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 SREK1Q8WXA9 508 aaKnown RBP19.51■□□□□ 0.71
NEDD8-201ENST00000250495 RND1Q92730 232 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 NXNL1Q96CM4 212 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 SCYL1Q96KG9 808 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 C16orf45Q96MC5 204 aaPredicted RBP19.51■□□□□ 0.71
NEDD8-201ENST00000250495 DGAT2Q96PD7 388 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 TTTY12Q9BZ98 90 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 OR51B5Q9H339 312 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 ZDHHC11Q9H8X9 412 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 IGSF5Q9NSI5 407 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 SACM1LQ9NTJ5 587 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 ANGPTL3Q9Y5C1 460 aa19.51■□□□□ 0.71
NEDD8-201ENST00000250495 EML6Q6ZMW3 1958 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 CCDC189A1A4V9 331 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 FAM166BA8MTA8 275 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 SAP18O00422 153 aaKnown RBP19.5■□□□□ 0.71
NEDD8-201ENST00000250495 ETHE1O95571 254 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 CAPN3P20807 821 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 TLX1P31314 330 aaPredicted RBP19.5■□□□□ 0.71
NEDD8-201ENST00000250495 CASQ1P31415 396 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 PIK3CBP42338 1070 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 STT3AP46977 705 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 RAP1GDS1P52306 607 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 IGLV3-21P80748 117 aaPredicted RBP19.5■□□□□ 0.71
NEDD8-201ENST00000250495 MPEG1Q2M385 716 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 MEX3BQ6ZN04 569 aaKnown RBP19.5■□□□□ 0.71
NEDD8-201ENST00000250495 MARVELD2Q8N4S9 558 aa19.5■□□□□ 0.71
NEDD8-201ENST00000250495 TEX9Q8N6V9 391 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms