RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RCN3Q96D15 328 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 SH3GL1Q99961 368 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 RPF2Q9H7B2 306 aaKnown RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 NEUROD4Q9HD90 331 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 SLC35C2Q9NQQ7 365 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 GIMAP4Q9NUV9 329 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 SH3BP4Q9P0V3 963 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 PCDHGB4Q9UN71 923 aa12.22□□□□□ -0.45
LSM8-201ENST00000249299 MRPS2Q9Y399 296 aaKnown RBP12.22□□□□□ -0.45
LSM8-201ENST00000249299 A0A096LPI6 279 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 A0A0G2JN53 185 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 ASPDHA6ND91 283 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 CFAP73A6NFT4 308 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 ERICH4A6NGS2 130 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 CLDN4O14493 209 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 AIM2O14862 343 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 POLR1CO15160 346 aaPredicted RBP12.21□□□□□ -0.45
LSM8-201ENST00000249299 CHST10O43529 356 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 KCNH1O95259 989 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 AIFM1O95831 613 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 MT-CO3P00414 261 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 LAMP1P11279 417 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 NUDT2P50583 147 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 DGKQP52824 942 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 PHC1P78364 1004 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 MXRA7P84157 204 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 PGS1Q32NB8 556 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 CEACAM20Q6UY09 585 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 CA13Q8N1Q1 262 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 OR9A4Q8NGU2 314 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 ZFP28Q8NHY6 868 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 DNAJB14Q8TBM8 379 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 OR5P2Q8WZ92 322 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 LRRC58Q96CX6 371 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 MAPKAP1Q9BPZ7 522 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 GPATCH1Q9BRR8 931 aaKnown RBP12.21□□□□□ -0.45
LSM8-201ENST00000249299 DDA1Q9BW61 102 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 ASPSCR1Q9BZE9 553 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 TGIF2Q9GZN2 237 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 STARD5Q9NSY2 213 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 TEX10Q9NXF1 929 aaPredicted RBP12.21□□□□□ -0.45
LSM8-201ENST00000249299 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 FBXW2Q9UKT8 454 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 ZNF292O60281 2723 aa12.21□□□□□ -0.45
LSM8-201ENST00000249299 ZFHX2Q9C0A1 2572 aaPredicted RBP12.21□□□□□ -0.46
LSM8-201ENST00000249299 RIF1Q5UIP0 2472 aaKnown RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 MDC1Q14676 2089 aaKnown RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 CCDC187A0A096LP49 1063 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 A0A0A6YYC8 382 aaPredicted RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 A0A1W2PRB8 838 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 EFCAB7A8K855 629 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 I3L1I5 382 aaPredicted RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 SGK494L7N484 410 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 RFXANKO14593 260 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 SLC30A4O14863 429 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 CASC3O15234 703 aaKnown RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 DNAJA2O60884 412 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 SCRG1O75711 98 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 DNAJC8O75937 253 aaPredicted RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 CTSBP07858 339 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 CD63P08962 238 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 ITGAXP20702 1163 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 PPIBP23284 216 aaKnown RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 NTSP30990 170 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 MPIP34949 423 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 RORAP35398 523 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 HSD17B7P56937 341 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 MC1RQ01726 317 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 NFYCQ13952 458 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 OR4F3Q6IEY1 312 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 TMPRSS12Q86WS5 348 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 TMEM126BQ8IUX1 230 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 TRIML2Q8N7C3 387 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 OR8J3Q8NGG0 315 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 GFM2Q969S9 779 aaKnown RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 TBC1D20Q96BZ9 403 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 MMABQ96EY8 250 aaPredicted RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 ZNF304Q9HCX3 659 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 MKKSQ9NPJ1 570 aaPredicted RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 SERHLQ9NQF3 203 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 ZNF282Q9UDV7 671 aaPredicted RBP12.2□□□□□ -0.46
LSM8-201ENST00000249299 UTS2RQ9UKP6 389 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 CLCA2Q9UQC9 943 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 ENTPD4Q9Y227 616 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 MMACHCQ9Y4U1 282 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 ZNF780BQ9Y6R6 833 aa12.2□□□□□ -0.46
LSM8-201ENST00000249299 IGLV3-12A0A075B6K2 115 aa12.19□□□□□ -0.46
LSM8-201ENST00000249299 TRBV5-3A0A0A0MS03 114 aa12.19□□□□□ -0.46
LSM8-201ENST00000249299 MYO1GB0I1T2 1018 aa12.19□□□□□ -0.46
LSM8-201ENST00000249299 C9JVG2 144 aa12.19□□□□□ -0.46
LSM8-201ENST00000249299 GSC2O15499 205 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms