RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CCDC151A5D8V7 595 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 TMPRSS11DO60235 418 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 VPS4BO75351 444 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 OR4F21O95013 312 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 WDPCPO95876 746 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 COX7A2P14406 83 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 TLX1P31314 330 aaPredicted RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 PLIN5Q00G26 463 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 OR52E8Q6IFG1 317 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 CYP20A1Q6UW02 462 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 FRMD7Q6ZUT3 714 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 CLNKQ7Z7G1 428 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 TRABD2AQ86V40 505 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 C4orf33Q8N1A6 199 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 BEST3Q8N1M1 668 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 OR2W6PQ8NHA6 318 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 SUN3Q8TAQ9 357 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 SELENOMQ8WWX9 145 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 TANKQ92844 425 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 DAZLQ92904 295 aaKnown RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 SNRNP40Q96DI7 357 aaKnown RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 BARD1Q99728 777 aaKnown RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 PELOQ9BRX2 385 aaKnown RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 TMEM109Q9BVC6 243 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 IQCGQ9H095 443 aaKnown RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 RPF2Q9H7B2 306 aaKnown RBP11.93□□□□□ -0.5
VPREB3-201ENST00000248948 WDR41Q9HAD4 459 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 AGPAT4Q9NRZ5 378 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 VPS4AQ9UN37 437 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 PCDHGB6Q9Y5F9 930 aa11.93□□□□□ -0.5
VPREB3-201ENST00000248948 EXPH5Q8NEV8 1989 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 TRBV11-1A0A0K0K1C0 115 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 ARHGAP10A1A4S6 786 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 A8MUI8 341 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 PPP6CO00743 305 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 FCHO1O14526 889 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 FGF17O60258 216 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 PRAMEF2O60811 474 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 LDB3O75112 727 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 EEDO75530 441 aaKnown RBP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 ESRRBO95718 433 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 AIFM1O95831 613 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 PDYNP01213 254 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 FAM58BPP0C7Q3 252 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 TSPAN8P19075 237 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 HMOX2P30519 316 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 STT3AP46977 705 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 LIPMQ5VYY2 423 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 FAM180AQ6UWF9 173 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 METTL4Q8N3J2 472 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 KIF2BQ8N4N8 673 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 CDYL2Q8N8U2 506 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 GBP7Q8N8V2 638 aaPredicted RBP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 CCDC63Q8NA47 563 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 MORN4Q8NDC4 146 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 MDS2Q8NDY4 140 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 ANKRD9Q96BM1 317 aaPredicted RBP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 NPAS2Q99743 824 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 UTP23Q9BRU9 249 aaKnown RBP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 MRPL1Q9BYD6 325 aaKnown RBP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 PARD6BQ9BYG5 372 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 PNO1Q9NRX1 252 aaKnown RBP11.92□□□□□ -0.5
VPREB3-201ENST00000248948 OXSMQ9NWU1 459 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 STMN3Q9NZ72 180 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 SENP1Q9P0U3 644 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 SLC12A4Q9UP95 1085 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 ATG4BQ9Y4P1 393 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 ASB4Q9Y574 426 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 CLCA3PQ9Y6N3 262 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 PTPN13Q12923 2485 aa11.92□□□□□ -0.5
VPREB3-201ENST00000248948 TLDC2A0PJX2 215 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 GABRR3A8MPY1 467 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 MANBAO00462 879 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 PROM1O43490 865 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 DYRK3O43781 588 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 GUCY1B2O75343 617 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 IFNA16P05015 189 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 CPA3P15088 417 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 TPP2P29144 1249 aaPredicted RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 TRHRP34981 398 aaPredicted RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 GPR143P51810 404 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 MLF1P58340 268 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 FOLH1Q04609 750 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 GALNT1Q10472 559 aaPredicted RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 TBL3Q12788 808 aaKnown RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 TUBA3CQ13748 450 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 SPRED3Q2MJR0 410 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 C18orf63Q68DL7 685 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 FCRLBQ6BAA4 426 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 TUBA3EQ6PEY2 450 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
VPREB3-201ENST00000248948 SRRM1Q8IYB3 904 aaKnown RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 ST13P4Q8IZP2 240 aaPredicted RBP11.91□□□□□ -0.5
VPREB3-201ENST00000248948 CISD2Q8N5K1 135 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms