RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 LYRM4Q9HD34 91 aa17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 C6orf203Q9P0P8 240 aaPredicted RBP17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 AURKCQ9UQB9 309 aa17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 CLCA2Q9UQC9 943 aa17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 GMEB1Q9Y692 573 aa17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 ZNF780BQ9Y6R6 833 aa17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 MDC1Q14676 2089 aaKnown RBP17.72■□□□□ 0.43
TNFSF9-201ENST00000245817 GOLGA4Q13439 2230 aaKnown RBP17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 DHRS12A0PJE2 317 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 H3BNX3 289 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 CXCR6O00574 342 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 PGRMC2O15173 223 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 GPC1P35052 558 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 FRKP42685 505 aaPredicted RBP17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 CRATP43155 626 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 NCBP2P52298 156 aaKnown RBP eCLIP17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 LIM2P55344 173 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 TNFRSF17Q02223 184 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 MLC1Q15049 377 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 RGNQ15493 299 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 TCTE1Q5JU00 501 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 NIPAL1Q6NVV3 410 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 SLC48A1Q6P1K1 146 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 LRRC74BQ6ZQY2 392 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 CLEC4FQ8N1N0 589 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 UCN3Q969E3 161 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 DUS3LQ96G46 650 aaKnown RBP17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 GTPBP2Q9BX10 602 aaKnown RBP17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 GORASP2Q9H8Y8 452 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 DAPP1Q9UN19 280 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 NAALAD2Q9Y3Q0 740 aa17.71■□□□□ 0.43
TNFSF9-201ENST00000245817 SIGLEC6O43699 453 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 PRKRAO75569 313 aaKnown RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 C9P02748 559 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 GPIP06744 558 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 CSNK2A2P19784 350 aaPredicted RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 CD1CP29017 333 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 MPIP34949 423 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 GZMMP51124 257 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 HSD11B2P80365 405 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 SLC14A1Q13336 389 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 RUNX2Q13950 521 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 SNAP47Q5SQN1 464 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 CPZQ66K79 652 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 WDR74Q6RFH5 385 aaPredicted RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 ZNF551Q7Z340 670 aaPredicted RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 SAMD14Q8IZD0 417 aaPredicted RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 PQLC1Q8N2U9 271 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 EID2Q8N6I1 236 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 FAM181AQ8N9Y4 354 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 OR5AK3PQ8NH89 298 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 CANT1Q8WVQ1 401 aa17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 ATOH1Q92858 354 aaPredicted RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 NPLQ9BXD5 320 aaPredicted RBP17.71■□□□□ 0.42
TNFSF9-201ENST00000245817 CROCCQ5TZA2 2017 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 TP53BP1Q12888 1972 aaPredicted RBP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 VPS13AQ96RL7 3174 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 HCRTR1O43613 425 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 GALR3O60755 368 aaPredicted RBP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 GCKP35557 465 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 VHLP40337 213 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 SEPHS1P49903 392 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 TMTC4Q5T4D3 741 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 SPRED1Q7Z699 444 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 OR52N2Q8NGI0 321 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 POP5Q969H6 163 aaKnown RBP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 PPWD1Q96BP3 646 aaKnown RBP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 VCX3BQ9H321 246 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 RPF2Q9H7B2 306 aaKnown RBP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 SLAMF7Q9NQ25 335 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 PRDM9Q9NQV7 894 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 ANAPC2Q9UJX6 822 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 RAB23Q9ULC3 237 aa17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 MRPS2Q9Y399 296 aaKnown RBP17.7■□□□□ 0.42
TNFSF9-201ENST00000245817 TNRC6BQ9UPQ9 1833 aaKnown RBP17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 RNF103-CHMP3A0A140T963 221 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 ZNF860A6NHJ4 632 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 KCNK5O95279 499 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 PRIM2P49643 509 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 VAC14Q08AM6 782 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 FADDQ13158 208 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 VMACQ2NL98 169 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 PRTGQ2VWP7 1150 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 TBCELQ5QJ74 424 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 GARNL3Q5VVW2 1013 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 OR52E8Q6IFG1 317 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 NAT6Q93015 286 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 AMDHD1Q96NU7 426 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 TACO1Q9BSH4 297 aaKnown RBP17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 GLIPR2Q9H4G4 154 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 CXorf36Q9H7Y0 433 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 SEMA3GQ9NS98 782 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 CCM2LQ9NUG4 571 aaPredicted RBP17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 CES1P1Q9UKY3 287 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 FAF1Q9UNN5 650 aaPredicted RBP17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 HCN4Q9Y3Q4 1203 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 MAP4K5Q9Y4K4 846 aa17.69■□□□□ 0.42
TNFSF9-201ENST00000245817 HNRNPRO43390 633 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms