RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 NIPSNAP1Q9BPW8 284 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 RHNO1Q9BSD3 238 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 NKX2-4Q9H2Z4 354 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 EHD3Q9NZN3 535 aa15.37■□□□□ 0.05
UBE3D-201ENST00000237186 RANBP2P49792 3224 aaKnown RBP15.36■□□□□ 0.05
UBE3D-201ENST00000237186 OR2A25A4D2G3 310 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 LRIT2A6NDA9 550 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 J3KTA2 159 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 PRICKLE3O43900 615 aaPredicted RBP15.36■□□□□ 0.05
UBE3D-201ENST00000237186 VIPP01282 170 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 IFNW1P05000 195 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 PKLRP30613 574 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 MAGEA8P43361 318 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 MLLT10P55197 1068 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF776Q68DI1 518 aaPredicted RBP15.36■□□□□ 0.05
UBE3D-201ENST00000237186 P2RY8Q86VZ1 359 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 DNAJC22Q8N4W6 341 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 ELSPBP1Q96BH3 223 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 HSPBAP1Q96EW2 488 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 VMP1Q96GC9 406 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 SARGQ9BW04 601 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF556Q9HAH1 456 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 CDH23Q9H251 3354 aa15.36■□□□□ 0.05
UBE3D-201ENST00000237186 CLDN24A6NM45 220 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 C5orf58C9J3I9 102 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 PCDH17O14917 1159 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 AXIN1O15169 862 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 PDE9AO76083 593 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 GADD45GO95257 159 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 KIR2DL1P43626 348 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ALDH9A1P49189 494 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ABATP80404 500 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 SGCGQ13326 291 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 MAPK11Q15759 364 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ADPRMQ3LIE5 342 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 PPP2R2DQ66LE6 453 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF770Q6IQ21 691 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 FAM180BQ6P0A1 224 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 Q6ZPB1 254 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 SCARF2Q96GP6 870 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 TMEM19Q96HH6 336 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 PLEKHA8Q96JA3 519 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 MAPKAP1Q9BPZ7 522 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 AICDAQ9GZX7 198 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 MVB12BQ9H7P6 319 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ZSCAN32Q9NX65 697 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 TEX10Q9NXF1 929 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 GALNT8Q9NY28 637 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 B3GNT3Q9Y2A9 372 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 DGKBQ9Y6T7 804 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 CLCA1A8K7I4 914 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 HMGN4O00479 90 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 PLRG1O43660 514 aaKnown RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 CCNB2O95067 398 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 FADS2O95864 444 aaKnown RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF12P17014 697 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ANKDD1AQ495B1 522 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 TNFAIP8L2Q6P589 184 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 SYCE2Q6PIF2 218 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 AHSA2Q719I0 299 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 CACUL1Q86Y37 369 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 CCDC103Q8IW40 242 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 GPR32P1Q8NGA4 272 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 PHF10Q8WUB8 498 aaKnown RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 RASSF5Q8WWW0 418 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 MYDGFQ969H8 173 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 DHRS1Q96LJ7 313 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 TEFMQ96QE5 360 aaKnown RBP15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ALPK1Q96QP1 1244 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 MYADMQ96S97 322 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 COPS4Q9BT78 406 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 SLC17A9Q9BYT1 436 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 ZNF226Q9NYT6 803 aa15.35■□□□□ 0.05
UBE3D-201ENST00000237186 C2orf16Q68DN1 1984 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 K7EQS6 105 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 FFAR1O14842 300 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 BCHEP06276 602 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 NR4A1P22736 598 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 PSMB9P28065 219 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 GDI1P31150 447 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 KCNJ5P48544 419 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 CCT3P49368 545 aaKnown RBP15.34■□□□□ 0.05
UBE3D-201ENST00000237186 TBCEQ15813 527 aaPredicted RBP15.34■□□□□ 0.05
UBE3D-201ENST00000237186 UAP1L1Q3KQV9 507 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 CYP27C1Q4G0S4 372 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 COLEC12Q5KU26 742 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 AMER3Q8N944 861 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 OR9Q2Q8NGE9 314 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 GGHQ92820 318 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 EXOSC8Q96B26 276 aaKnown RBP15.34■□□□□ 0.05
UBE3D-201ENST00000237186 PPP1R14BQ96C90 147 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 DPH7Q9BTV6 452 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 RSPO3Q9BXY4 272 aaPredicted RBP15.34■□□□□ 0.05
UBE3D-201ENST00000237186 IMP3Q9NV31 184 aaKnown RBP15.34■□□□□ 0.05
UBE3D-201ENST00000237186 FBXL12Q9NXK8 326 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 MSRAQ9UJ68 235 aa15.34■□□□□ 0.05
UBE3D-201ENST00000237186 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.33■□□□□ 0.05
UBE3D-201ENST00000237186 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.33■□□□□ 0.05
UBE3D-201ENST00000237186 EPOPA6NHQ4 379 aa15.33■□□□□ 0.05
UBE3D-201ENST00000237186 MAN1A2O60476 641 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms