RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MCFD2Q8NI22 146 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 SLC38A5Q8WUX1 472 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 SMARCD2Q92925 531 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 ZBED6CLQ96FA7 236 aaPredicted RBP20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 F2RL3Q96RI0 385 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 CDCA4Q9BXL8 241 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 CLN6Q9NWW5 311 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 SLC23A2Q9UGH3 650 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 ACSL5Q9ULC5 683 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 TMCC3Q9ULS5 477 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 CNOT3O75175 753 aaKnown RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PORP16435 677 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 CD40LGP29965 261 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 GSSP48637 474 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 SMIM11AP58511 58 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PTGES3Q15185 160 aaKnown RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 C6orf120Q7Z4R8 191 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 MMP21Q8N119 569 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 RPL3LQ92901 407 aaKnown RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 DHRS1Q96LJ7 313 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 ASB16Q96NS5 453 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 ACAT2Q9BWD1 397 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 TMEM121BQ9BXQ6 578 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 ALOXE3Q9BYJ1 711 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 NMNAT1Q9HAN9 279 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PRSS16Q9NQE7 514 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 TAS2R7Q9NYW3 318 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 THAP10Q9P2Z0 257 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 MGAT4BQ9UQ53 548 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PCYT1BQ9Y5K3 369 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PRRC2BQ5JSZ5 2229 aaKnown RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 DSPPQ9NZW4 1301 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 NDUFS4O43181 175 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 MFN2O95140 757 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 ST3GAL4Q11206 333 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 AGERQ15109 404 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 SYT16Q17RD7 645 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 ZNF404Q494X3 552 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PIP5KL1Q5T9C9 394 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 FRMPD2BQ6IN97 320 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 KLHL17Q6TDP4 642 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 C2orf73Q8N5S3 287 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 RNF217Q8TC41 542 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 ZNF607Q96SK3 696 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 MENTQ9BUN1 341 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 DSN1Q9H410 356 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 SLAMF7Q9NQ25 335 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 IRAK4Q9NWZ3 460 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 GPR83Q9NYM4 423 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 CCDC59Q9P031 241 aaKnown RBP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 PRKAB1Q9Y478 270 aa20.9■□□□□ 0.94
SMARCD2-201ENST00000225742 TMEM247A6NEH6 219 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 METTL15A6NJ78 407 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 TAF4O00268 1085 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 STSP08842 583 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 SLC35G4P0C7Q5 338 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 ADORA3P0DMS8 318 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 PIPP12273 146 aaPredicted RBP20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 PPP5CP53041 499 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 PUM1Q14671 1186 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 DUSP7Q16829 419 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 SPDYE7PQ495Y7 208 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 BTLAQ7Z6A9 289 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 AMER2Q8N7J2 671 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 FAM46DQ8NEK8 389 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 GTPBP3Q969Y2 492 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 ARMC5Q96C12 935 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 ITPKCQ96DU7 683 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 TMEM19Q96HH6 336 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 ZFYVE19Q96K21 471 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 NXF2Q9GZY0 626 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 DDX31Q9H8H2 851 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 CUEDC1Q9NWM3 386 aaPredicted RBP20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 MS4A12Q9NXJ0 267 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 PCDHGA3Q9Y5H0 932 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 KLK4Q9Y5K2 254 aa20.89■□□□□ 0.93
SMARCD2-201ENST00000225742 FAAHO00519 579 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 CLEC3AO75596 197 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 GASTP01350 101 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 PCCBP05166 539 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 BCHEP06276 602 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 DRD2P14416 443 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 CHMP24386 653 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 GADD45AP24522 165 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 DMPKQ09013 629 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 CYP27C1Q4G0S4 372 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 TTLQ8NG68 377 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 HERVK_113Q902F9 699 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 TEFMQ96QE5 360 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 TEX101Q9BY14 249 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 UCK2Q9BZX2 261 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 SIRT3Q9NTG7 399 aaPredicted RBP20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 CHCHD3Q9NX63 227 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 SELENONQ9NZV5 590 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 A0A1W2PPV9 198 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 TBC1D3BA6NDS4 549 aa20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 OTOL1A6NHN0 477 aaPredicted RBP20.88■□□□□ 0.93
SMARCD2-201ENST00000225742 SH3BP5O60239 455 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms