RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 HBEGFQ99075 208 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 MRPL1Q9BYD6 325 aaKnown RBP12.84□□□□□ -0.35
UPK1A-201ENST00000222275 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 PRDM9Q9NQV7 894 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 SEMA3GQ9NS98 782 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 HCN3Q9P1Z3 774 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 ANAPC2Q9UJX6 822 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 CENPEQ02224 2701 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 SCN3AQ9NY46 2000 aa12.84□□□□□ -0.35
UPK1A-201ENST00000222275 SPTBN1Q01082 2364 aaKnown RBP12.84□□□□□ -0.35
UPK1A-201ENST00000222275 DOCK10Q96BY6 2186 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 A0A0A6YYD5 115 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 A0A0G2JN53 185 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 ZNF860A6NHJ4 632 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 RTCAO00442 366 aaKnown RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 SEC22BO75396 215 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 KLK1P06870 262 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 HEXBP07686 556 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 FHP07954 510 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 FAM58BPP0C7Q3 252 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 LINC00032P0C843 101 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 CPN2P22792 545 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 CERS1P27544 350 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 CD97P48960 835 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 MAPK12P53778 367 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 LIM2P55344 173 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 HSD17B7P56937 341 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 MAT1AQ00266 395 aaKnown RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 HMGCS1Q01581 520 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 TBL3Q12788 808 aaKnown RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 KLRB1Q12918 225 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 BIKQ13323 160 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 RUNX2Q13950 521 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 NR6A1Q15406 480 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 SMU1Q2TAY7 513 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 ATP6AP1LQ52LC2 224 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 CES4AQ5XG92 561 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 SCIMPQ6UWF3 145 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 SHISA6Q6ZSJ9 500 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 MRGPREQ86SM8 312 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 GPR180Q86V85 440 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 C1orf52Q8N6N3 182 aaKnown RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 RBMXL3Q8N7X1 1067 aaKnown RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 Q8NA96 180 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 METTL21AQ8WXB1 218 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 MIB2Q96AX9 1013 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 C19orf60Q96EN9 201 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 PEX11GQ96HA9 241 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 SLC25A23Q9BV35 468 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 FAIM2Q9BWQ8 316 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 C20orf27Q9GZN8 174 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 LRTM1Q9HBL6 345 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 ZBTB20Q9HC78 741 aaPredicted RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 CTSFQ9UBX1 484 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 C19orf25Q9UFG5 118 aaPredicted RBP12.83□□□□□ -0.36
UPK1A-201ENST00000222275 MMACHCQ9Y4U1 282 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 SHANK1Q9Y566 2161 aa12.83□□□□□ -0.36
UPK1A-201ENST00000222275 GNG14A0A1W2PPG7 69 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TMEM233B4DJY2 109 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 C4orf51C9J302 202 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 PCDH7O60245 1069 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 ALOX12BO75342 701 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 SKAP2O75563 359 aaPredicted RBP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TGDSO95455 350 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 ACPPP15309 386 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 DDX5P17844 614 aaKnown RBP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TIA1P31483 386 aaKnown RBP eCLIP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 EMP2P54851 167 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 OLR1P78380 273 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 BTKQ06187 659 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 KLC1Q07866 573 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 HEPACAMQ14CZ8 416 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 MINDY4Q4G0A6 757 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 PRR30Q53SZ7 412 aaPredicted RBP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 VWA2Q5GFL6 755 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 XKR7Q5GH72 579 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 MFSD4BQ5TF39 518 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 MRM1Q6IN84 353 aaKnown RBP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 ZNF793Q6ZN11 406 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 QSOX2Q6ZRP7 698 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 Q6ZSR9 355 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 ZC3H7AQ8IWR0 971 aaKnown RBP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 FAM9CQ8IZT9 166 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TEX19Q8NA77 164 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 OR5T3Q8NGG3 340 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TANKQ92844 425 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 APIPQ96GX9 242 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 SPSB2Q99619 263 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 CRB3Q9BUF7 120 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 ZNF717Q9BY31 904 aaPredicted RBP12.82□□□□□ -0.36
UPK1A-201ENST00000222275 MFRPQ9BY79 579 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 TUBB1Q9H4B7 451 aa12.82□□□□□ -0.36
UPK1A-201ENST00000222275 CCDC134Q9H6E4 229 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms