RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C8BP07358 591 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF763Q0D2J5 394 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 DECR1Q16698 335 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 SFRP4Q6FHJ7 346 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 BRAT1Q6PJG6 821 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 SECISBP2Q96T21 854 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 REEP4Q9H6H4 257 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 Q9N2J8 555 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TLR9Q9NR96 1032 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 PAK1IP1Q9NWT1 392 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 HMGN1P05114 100 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 HEXBP07686 556 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF280AP59817 542 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TBC1D25Q3MII6 688 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 LMO3Q8TAP4 145 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 SERINC1Q9NRX5 453 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 KIAA0513O60268 411 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 CAPNS1P04632 268 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 GP1BBP13224 206 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 CEACAM7Q14002 265 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 C6orf89Q6UWU4 347 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 UBE2Q1Q7Z7E8 422 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 CELF5Q8N6W0 485 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 OR10A4Q9H209 315 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TMEM185BQ9H7F4 350 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 MOV10Q9HCE1 1003 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TAS2R10Q9NYW0 307 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 FAM208AQ9UK61 1670 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 HSPA12AO43301 675 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 MAFKO60675 156 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 RCBTB2O95199 551 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 MT-ND2P03891 347 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 ATP5A1P25705 553 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 ITGB8P26012 769 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 LCN1P31025 176 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 SCNN1AP37088 669 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 FOXA1P55317 472 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC26A5P58743 744 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 MAB21L1Q13394 359 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF599Q96NL3 588 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 C1orf21Q9H246 121 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 FKBP14Q9NWM8 211 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 KCMF1Q9P0J7 381 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 A0A0A6YYH2 397 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 PRSS51A0A1B0GVH4 220 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 A6NJ64 397 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 OPN1LWP04000 364 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 SH3BP2P78314 561 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 IRF5Q13568 498 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 USP53Q70EK8 1073 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ZDHHC1Q8WTX9 485 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 S100A16Q96FQ6 103 aaKnown RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 TMEM168Q9H0V1 697 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 C14orf166Q9Y224 244 aaKnown RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 B4GAT1O43505 415 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 CD72P21854 359 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 HCAR3P49019 387 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 SRYQ05066 204 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 LRFN4Q6PJG9 635 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 POP5Q969H6 163 aaKnown RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 OR51B6Q9H340 312 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ZBTB20Q9HC78 741 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 MKLN1Q9UL63 735 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 MEMO1Q9Y316 297 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF821O75541 412 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 IFNA7P01567 189 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 GADD45AP24522 165 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 TPGS2Q68CL5 300 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF283Q8N7M2 679 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 TTLQ8NG68 377 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 HCN4Q9Y3Q4 1203 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC30A8Q8IWU4 369 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 NETO1Q8TDF5 533 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 SMPDL3AQ92484 453 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 SDHAF3Q9NRP4 125 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 PRICKLE3O43900 615 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 ASGR2P07307 311 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 AK4P27144 223 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 E2F1Q01094 437 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 HMBOX1Q6NT76 420 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 REEP3Q6NUK4 255 aa13.06□□□□□ -0.32
TGFBR3-201ENST00000212355 OR9Q2Q8NGE9 314 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms